Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3110 ATGGAAATACGTCAGTCTTTCGCAGCCATGGCATTTGATCAAACCTCTGTTCCCTGCGATCTAAGATCACTAAATGTTACTCGAGCTGCGGCCGAAGAGCCACTCGTTCCTCCTGCTAGTAAACCGCTTCAAACTGCAGAATATTTCCCTCCAAATTCGGTTTGGGACCATGTTAGCTCTGGTGCGGTGCCGCTTGTCTACCCTGCGTCTGTCTCTGATGCTGGTTTGGTTAGAATAGCGTACGGAAATGTAACTTCGGCTATTGCTTCTCCTACCTGGTGTGTTCGTCCTGCTGTTCCGGTTCACCCCACTGTAAACCCCGCTGTTGGGCTTAATTATGGTTCAGGTTTTACCAATCGGTTCATGAGAGCCAATGCCGTTGATCTTTCGGGTAGTGTGGTTGTGGCTTCCCATGGATATCCTATTAATTTGGGAAATTCGGTTTCTGGTAATGGCTTTGATAATGCCCTTCCTGGCAGCAGCAGGGTGGTTGGAAATGCTGTTCATCAGATAGGTGGTGCTGTTGTACCAGGCGGGATTGGTTTTGGTTCCTCTCTCAGAACTGATCAAGGCAGTAACGAGGGCATGAATGACTCAGTATCTGGACAAAAAATGAAGCTATTGTGCAGCTATGGTGGTAAGATTTTGCCTAGACCCTGTGATGGAAAATTGAGGTATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAGAGGCACGAGCTTCAATGAATTGGCACAAAAGATGACTGATACGTATGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGAGGATCTTGATAATATGATGGAGGAGTATGAAAAATTGATTGAAAGGTCTCCTGATGGCTCTGCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTGCAGTTTGTAGACTTACAGGATAATGGGCAAAAATACGTTGAAGCTGTGAATGGAATAATAGATGGGATTAGTGGTAAACTGACAAGGAAAGAGAGTATTACAAGTGCAGCTTCCACCCAGAATTCTGATTTGAGTGTGATAGAAGCTCTTGATGGCTCGATTGCTGGTCAAGCCGATGTCAGTCAAGTGCCTTCATCTGGCATGCCTGCGGGAAATGGAACTGCTTCTCAGGATTCTACTTCAAACATGAAGGTTCCTGAAAGCATTGCATCAGTTTACTCAGATGCTTTTGTGATTCCATTGGGCACTTCTGCAACTAATTCTGGTCCAATGCACAATCCACCTTTTCATAATGAGGTCGAATTAGAAAAGTCTGTGCCTGTTACTTTATGCCAGGAGGAATTTGGGTTGCAGCATCCTGTAAAGGAAGCTCCACCACCTGCACCTAATTTGCAAGCTTCGGACATTACTGCAACTAACTCTGGTCCAAATCACCGACAACCTTTCCATAATGAGTTGCAGTTTGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCATATTGGGTTGCAGCAACCTGGAATGGAAAATCCTCTGCCTGCACTTTATATGCACCCTCTGATTGATCCTTTCCCAGAAGTTATGAACAATGCAGATTTTGTTCGGCTGCCTCGTCAGATGGGGTTCTCAAATCCTGAGCTTTTCAGCAAGACTGGGTCCATATACTCGCAGCATCAATTACATGAAAATACTCATGGTCTTGTGTCCCATCAAGTGGTCCCTGCTGTGCAAATGACAATGGCTCAGTCATCTTCTCATGCAGGTGTACATTCAAATGCTATTCAACCACAACTATTGCTGCAGATGCAGCAAAATGTCTTGGATAAACATAGTGATGGAAATACGTCAGGTAGTTACAGCTGGGTTCAGGCTCCTCCACCAGAGCATGTTGTTTTCCCTAATGTATTATTACCCCAACAAACATTAGTGAATCCCGAAAAAACCCAAAGATCAGCGGATTGTTATATGTGTCAGAAAAAGCTACCCTATGCACATTCACATAATATTTGTGCAGGTCTGGCTCCTGATTCAAACCCAAGTTACCATAGTCTCCCTATGAATGACAATTCAAAAGCGCAGGCAACAAATAAAGTTGTAGTAACTACAGCAACACCAGAAGGCATGGTTGAGCAAGTAGTTGGGACCAGACCCATGATTGTTGGCAAGTCTGAGCTTGGAGCAATGCATTATAAAGAAGCAACTGTGCTGTCCTGTAATCTTGGGTCAGAGCCTGAAGGTGAGAGGCATTTCTCACAGAAGCCAGACAATTTGGATCACCAGAATACAATTGTCAAGGGAACAATTGTAGGAGCTGGTGAAAAACAGTTACTAAATGCTGGTCGCACAGGAACAGCACCACTGCCTTATCTAGATGATGTTGTCTGCCAACATGTGATTCCAGTAGAAAACTGGGCTAAAGAAGATGTAATTGTTAATAAACCTATTACTGCTGATATGCCTTTAGTTGGTTGCGCATCTGTTGAAACTTCTCAGTGTACAGTTCAAGAATCTGCAAAAGGTTATACCAATGAACTCACTAGCATTGTTTCAAAAGCAGATATTGTGGAGAATTGGATTGCAAAGGACCATCTCAAACCTGTTGATTTAAGGGTGGAACCCCTCAAGATAATCAATCCTGAAAGTTATGCAGACAAACCTGAAGTTCATGCAAGTTATGATAAAGTAGATCACAGTACTCAGTGTTCTGTAGAGAAGAAAGGGGCTTTGGATAACAACCTTAGTAGATCAAAGTTGGATGTCGACGCAAATCAAATTAATACGATGGATGTACTTCCTAGTTTTATTATGGAAGTTCCGTACGGTAATAATTCCAGGCCAGCAGATTATAATGAGGGTGATGTATTCTCATCTTCGACTTCACCATCTGTCAGGTTTGGAGATGCACAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCATGGAATATACACGGCTCGTACTTTCCACCACCTAGACCTAAAAAAATTGCATTAGAGAAAGAACATTATTCTTATAAGGACCAGTTTGGTGAGAATCCAGGCAACAGTGCTGAACAGAATGTAGCAGCTCCATTGGATAATGGCCTGGCATTCAAACAGAATTTAACTTTGGAAGATGCTCGATCTGCCAAGGGATCATCCCAGGACCAACAGCTTCAAGCAGTTGCTGAAGGCGTAGCTGCTTCTGTTCTGCACTCGAGCATTCCTTCAAATCCTGAATTGCATGCCAGAGATGTTTCCTTTCGTGGAGAGACAGAAGATGGATATGTTCAAAATAGTGAAATAGATGTACAGTGTAAAAGTACAGCACAGGATGTAGAGAGCAAGCTTCCAGAGAAGGCAAATTTTGGTTTTCCAATTACAGATCTTGGAGCATTGCAGGTTATAAAGAATTGTGACCTTGAAGAGCTGGTAGAATTGGGCTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGCACGGATGTTGCAATAAAGCGGATTAATGATCGAGCTGACTTTTGGAATGAAGCAATCAAGCTAGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTATGGTGTTGTGCTTGATGGTCCAGGAGGTTCTGTTGCTACAGTAACTGAATATATGGTTAATGGCTCTCTTAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCTATGGACGTAGCTTTTGGTATGGAATACCTACACGGGAAAAACATAGTACACTTCGACTTGAAAAGTGACAACTTACTTGTGAATCTGCGAGATCCACACCGCCCAATATGCAAGGTAATGGTTAGTGAGGTTGGTGACCTTGGTCTATCAAAAGTGAAATGTCAGACCCTGATATCTGGGGGTGTGAGAGGAACTCTACCCTGGATGGCCCCAGAACTCTTGAATGGAAGTAGCAGCCTTGTCTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCCTGTGGGAACTTCTCACTGGAGAAGAGCCATATGCTGACTTGCACTATGGAGCTATCATAGGGGGTATTGTGAGCAACACTTTAAGGCCTCCAGTTCCAGAAACCTGTGATCCGGAATGGCGATTACTGATGGAGCGGTGCTGGTCATCTGAGACATCAGAAAGACCAACCTTCACTGAGGTCGCCAATGAATTACGCCAGATGGCAGCCAAGGTCTCCCCCAAAGGACAAAATCAATAG 4227 0.4381 MEIRQSFAAMAFDQTSVPCDLRSLNVTRAAAEEPLVPPASKPLQTAEYFPPNSVWDHVSSGAVPLVYPASVSDAGLVRIAYGNVTSAIASPTWCVRPAVPVHPTVNPAVGLNYGSGFTNRFMRANAVDLSGSVVVASHGYPINLGNSVSGNGFDNALPGSSRVVGNAVHQIGGAVVPGGIGFGSSLRTDQGSNEGMNDSVSGQKMKLLCSYGGKILPRPCDGKLRYVGGQTRIISVRRGTSFNELAQKMTDTYGQPVVIKYQLPDEDLDALVSVSCPEDLDNMMEEYEKLIERSPDGSAKLRVFLFSASELDPSGVVQFVDLQDNGQKYVEAVNGIIDGISGKLTRKESITSAASTQNSDLSVIEALDGSIAGQADVSQVPSSGMPAGNGTASQDSTSNMKVPESIASVYSDAFVIPLGTSATNSGPMHNPPFHNEVELEKSVPVTLCQEEFGLQHPVKEAPPPAPNLQASDITATNSGPNHRQPFHNELQFEKSVPVTLSQQHIGLQQPGMENPLPALYMHPLIDPFPEVMNNADFVRLPRQMGFSNPELFSKTGSIYSQHQLHENTHGLVSHQVVPAVQMTMAQSSSHAGVHSNAIQPQLLLQMQQNVLDKHSDGNTSGSYSWVQAPPPEHVVFPNVLLPQQTLVNPEKTQRSADCYMCQKKLPYAHSHNICAGLAPDSNPSYHSLPMNDNSKAQATNKVVVTTATPEGMVEQVVGTRPMIVGKSELGAMHYKEATVLSCNLGSEPEGERHFSQKPDNLDHQNTIVKGTIVGAGEKQLLNAGRTGTAPLPYLDDVVCQHVIPVENWAKEDVIVNKPITADMPLVGCASVETSQCTVQESAKGYTNELTSIVSKADIVENWIAKDHLKPVDLRVEPLKIINPESYADKPEVHASYDKVDHSTQCSVEKKGALDNNLSRSKLDVDANQINTMDVLPSFIMEVPYGNNSRPADYNEGDVFSSSTSPSVRFGDAQDSSNSLFSNQDPWNIHGSYFPPPRPKKIALEKEHYSYKDQFGENPGNSAEQNVAAPLDNGLAFKQNLTLEDARSAKGSSQDQQLQAVAEGVAASVLHSSIPSNPELHARDVSFRGETEDGYVQNSEIDVQCKSTAQDVESKLPEKANFGFPITDLGALQVIKNCDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVMVSEVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPETCDPEWRLLMERCWSSETSERPTFTEVANELRQMAAKVSPKGQNQ* 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3110 1408 Pfam Protein tyrosine and serine/threonine kinase 1143 1394 IPR001245 GO:0004672|GO:0006468
Amo13g3110 1408 ProSitePatterns Protein kinases ATP-binding region signature. 1145 1166 IPR017441 GO:0005524
Amo13g3110 1408 ProSiteProfiles Protein kinase domain profile. 1139 1398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3110 1408 SUPERFAMILY Protein kinase-like (PK-like) 1133 1393 IPR011009 -
Amo13g3110 1408 PRINTS Tyrosine kinase catalytic domain signature 1365 1387 IPR001245 GO:0004672|GO:0006468
Amo13g3110 1408 PRINTS Tyrosine kinase catalytic domain signature 1208 1221 IPR001245 GO:0004672|GO:0006468
Amo13g3110 1408 PRINTS Tyrosine kinase catalytic domain signature 1300 1310 IPR001245 GO:0004672|GO:0006468
Amo13g3110 1408 PRINTS Tyrosine kinase catalytic domain signature 1245 1263 IPR001245 GO:0004672|GO:0006468
Amo13g3110 1408 Gene3D Transferase(Phosphotransferase) domain 1 1213 1408 - -
Amo13g3110 1408 SMART serkin_6 1139 1397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3110 1408 SUPERFAMILY CAD & PB1 domains 221 310 - -
Amo13g3110 1408 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 962 1401 - -
Amo13g3110 1408 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 166 915 - -
Amo13g3110 1408 CDD STKc_MAP3K-like 1145 1394 - -
Amo13g3110 1408 Gene3D - 223 308 - -
Amo13g3110 1408 Pfam PB1 domain 221 307 IPR000270 GO:0005515
Amo13g3110 1408 MobiDBLite consensus disorder prediction 376 400 - -
Amo13g3110 1408 PANTHER SERINE-THREONINE PROTEIN KINASE 962 1401 - -
Amo13g3110 1408 PANTHER SERINE-THREONINE PROTEIN KINASE 166 915 - -
Amo13g3110 1408 CDD PB1_UP2 208 306 - -
Amo13g3110 1408 SMART PB1_new 219 308 IPR000270 GO:0005515
Amo13g3110 1408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1251 1263 IPR008271 GO:0004672|GO:0006468
Amo13g3110 1408 Gene3D Phosphorylase Kinase; domain 1 1126 1212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3110 Amo-Chr13 90896894 90906546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3110 203 673 MAP Kinase Kinase Kinase AT3G46920 35.400 1.68e-63 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo13g3110 PK_Tyr_Ser-Thr 5.6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3110 - - ahf:112732322 2726.04