Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3063 CCTTCTTCACGGGGCATCTACCTGAGGGAGGCTACTGCTTTCCAACAATCTACTGAGACATGCTACTTTTGCATTTGTCTTTACCAGCTAGGTCTCAACTTGGACCAAGGGAAAGGAGCCGATAGAGTAACAGCACCAGAAGTAGGCTTCTTGAATCCACCGGAAGAGGCCTCCGGTAGCGGCAAGCACTTTCACGACGACGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCCAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAACATAGCTGAACGGTTGCGCAAAGAAAGAATAGCAGAAAGAATCAGGGCTCTACAAGAACTGGTTCCAAGTGTCAACAAGGTATGTAACTGCTCTAATGCAGTTTGTGATCCTCTTTAA 450 0.4889 PSSRGIYLREATAFQQSTETCYFCICLYQLGLNLDQGKGADRVTAPEVGFLNPPEEASGSGKHFHDDVLDARAKNVFHGQPMPTTIPAAPHPPTMRPRVRARRGQATDPHNIAERLRKERIAERIRALQELVPSVNKVCNCSNAVCDPL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3063 149 MobiDBLite consensus disorder prediction 82 106 - -
Amo13g3063 149 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 149 IPR011598 GO:0046983
Amo13g3063 149 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 138 - -
Amo13g3063 149 Gene3D - 98 144 IPR036638 GO:0046983
Amo13g3063 149 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 23 138 - -
Amo13g3063 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 137 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3063 Amo-Chr13 85269822 85271139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3063 23 138 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 65.000 6.14e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3063 - - ahf:114924986 216.468