Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3062 ATGAAATCAGTGATTGATCGATACAACAAAACAAAAGAGGAGCATAACCCCCTTGGAAGTTCAACCTCTGAGATTAAGAACTACTGTCACAAAAATGGCAGTGTTCCTTTGGACTTTTTCTTTGATGACTGTCTCTACATCATTCAGTCCTTCCAATCAACTGAAAATAATGAGGAGGCAGCAATGTTAAGGCAACAATTGCAGAACTTGCAAGAAAGTCACCGGCAAATGATGGGAGAAGAACTGTCAGGTATGACTGTCAAAGATTTACATAGTTTAGAGAACCAACTGGAAGTTAGCCTCCATGGTGTCCGTGCAAAAAAGGAACAACTTTTAATGGAGGAAATACAGGAACTGAATCGAAAGGGGAACCTCATACACCAAGAAAATATGGAACTGTATAAGAAGGTAAACCTAATTCGTCAAGAAAACACGGAACTGAAGAAGAAGGTCTATGGAACAAGAAATGGGAGTGGAACAGACAGAAACTCTGTTATAACAAATGGTATAAGCATAGAGGAAGACTTGCAGGTTCCTGTGAATCTCCAGCTAAGCCAACCACAGCAACAGAACTATGAGGCCACGTCAGGAGCCACAAAGTTGGGGTATGATCTTATTTAG 621 0.4058 MKSVIDRYNKTKEEHNPLGSSTSEIKNYCHKNGSVPLDFFFDDCLYIIQSFQSTENNEEAAMLRQQLQNLQESHRQMMGEELSGMTVKDLHSLENQLEVSLHGVRAKKEQLLMEEIQELNRKGNLIHQENMELYKKVNLIRQENTELKKKVYGTRNGSGTDRNSVITNGISIEEDLQVPVNLQLSQPQQQNYEATSGATKLGYDLI* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3062 206 MobiDBLite consensus disorder prediction 1 19 - -
Amo13g3062 206 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 56 200 - -
Amo13g3062 206 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 27 - -
Amo13g3062 206 ProSiteProfiles K-box domain profile. 53 143 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo13g3062 206 PANTHER SERUM RESPONSE FACTOR HOMOLOG 56 200 - -
Amo13g3062 206 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 27 - -
Amo13g3062 206 Coils Coil 130 150 - -
Amo13g3062 206 Pfam K-box region 52 137 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo13g3062 206 Coils Coil 53 80 - -
Amo13g3062 206 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3062 Amo-Chr13 85193408 85200881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3062 1 203 MADS-box Gene Family AT3G57230 47.783 5.89e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3062 K09264 - gmx:100812413 248.44