Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3045 ATGAATTCTGCTGGTCTGCCCCTCACCCTGGGAAGAGTTCCTCCAAGCGATTTGGTGATAAAGGATTCAGAGGTTTCGGGAAAGCATGCCATGATAAATTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGCTTAAATGGAACACTCTTGAATTCTAGGCCAATCAACCATCCAGACACTGGAAGCAGGCTTTGGGGAGATCCAGTGAATCTTGCTGATGGCGATATCATAACACTTGGAACAACATCGAACATAAGTGTTCATGTTGCTGCACAAAATCAGCAACGCATTCCATTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTAGAGGAGCAAAACAGCTTGCTATGGAAGATGTTTGCTATTATCAATGGCCTCTGCCTGGGCTGGATCAGTTTGGGCTATTTGGTATCTGCGATGGACATGGTGGAGATGGGGCTGCTAAATCCGCAAGCAAACTTTTTCCTGAGATAATTGCTAATATATTATTGGATTCATCAAAAAGGGAGCGGATTTTATCACTTCATGATGCTTCAGAAATTCTAAGAGATGCATTTTCTCAAACAGAAGCATGCTTGAATCATTACTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCCGATGGTGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAGTGTAAATGGGGAACAAATCAAGATGTCGGAAGATCACAAGATAACAACTTATTCTGAAAGACAGAGAATTGAAGAGACTGGTGAACCATTGAAAGATGGGGAAACACGTTTATATGGGATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGCTCAGAGCCTTATATTAGTCAAGTTGTGCATATTGATCAAGCAAGCAGGGCTTTTGCCGTTCTAGCTAGTGACGGGCTTTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTGTACAGAGAGAGAGAATTTAGCAGAAAAGATTGCTAGTTCATTGTTGGCTGAGGCTAAGACACTCAGAACAAAGGACAATACCTCTGTAATTTTCTTAGATTTTGATAGCTTCAATAGATTTTCTTGTAAAGTTGAATCCTAG 1164 0.421 MNSAGLPLTLGRVPPSDLVIKDSEVSGKHAMINWNLDKMKWELVDMGSLNGTLLNSRPINHPDTGSRLWGDPVNLADGDIITLGTTSNISVHVAAQNQQRIPFGVGMASDPMALRRGAKQLAMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIANILLDSSKRERILSLHDASEILRDAFSQTEACLNHYYEGCTATVLLVWADGENFFAQCANVGDSACVMSVNGEQIKMSEDHKITTYSERQRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAVLASDGLWDVISMKKAIQLVLQMREKYCTERENLAEKIASSLLAEAKTLRTKDNTSVIFLDFDSFNRFSCKVES* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3045 387 PANTHER PROTEIN PHOSPHATASE 2C 2 386 IPR015655 GO:0004722|GO:0006470
Amo13g3045 387 CDD PP2Cc 116 375 IPR001932 -
Amo13g3045 387 ProSiteProfiles Forkhead-associated (FHA) domain profile. 8 59 IPR000253 GO:0005515
Amo13g3045 387 SUPERFAMILY PP2C-like 115 377 IPR036457 -
Amo13g3045 387 SMART FHA_2 7 59 IPR000253 GO:0005515
Amo13g3045 387 SMART PP2C_4 98 373 IPR001932 -
Amo13g3045 387 PANTHER PROTEIN PHOSPHATASE 2C 70 2 386 - -
Amo13g3045 387 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Amo13g3045 387 ProSiteProfiles PPM-type phosphatase domain profile. 104 375 IPR001932 -
Amo13g3045 387 Pfam FHA domain 9 84 IPR000253 GO:0005515
Amo13g3045 387 Gene3D - 1 112 - -
Amo13g3045 387 SUPERFAMILY SMAD/FHA domain 6 87 IPR008984 GO:0005515
Amo13g3045 387 CDD FHA 3 93 IPR000253 GO:0005515
Amo13g3045 387 Pfam Protein phosphatase 2C 122 368 IPR001932 -
Amo13g3045 387 Gene3D - 113 383 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3045 Amo-Chr13 82399335 82403340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3045 2 377 PP2C-type Phosphatase Gene Family AT5G19280 64.781 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3045 K01090 - gmx:100170643 657.907