Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3015 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCTGTGCTCCTGATTGTGAATACAGAAGTTTGGACCTCTTCATATATGGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGTAA 390 0.4846 MEREDEDATQERRLFRRALSSLLGSIEAAAAARACCAPDCEYRSLDLFIYGNNADRFLNWSTRFQIVLGVARGLQYLHEDSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFAGTL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3015 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3015 129 Pfam Protein kinase domain 63 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g3015 129 Gene3D Transferase(Phosphotransferase) domain 1 3 129 - -
Amo13g3015 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Amo13g3015 129 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 129 - -
Amo13g3015 129 SUPERFAMILY Protein kinase-like (PK-like) 40 128 IPR011009 -
Amo13g3015 129 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 42 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3015 Amo-Chr13 79582395 79583220 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3015 43 129 Receptor kinase-like Gene Family AT1G70530 56.322 4.14e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g3015 Pkinase 6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3015 - - adu:107478947 177.948