Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2982 ATGGCGGTGCCGTTGCTCTCCAAGAAGATCGTGAAGAAGCGCGTCAAGAAGTTCAAACGCCCTCAGAGCGACCGCAAGATCTCCGTCAAGGAGGAAGTTCAAGGGATGCACTTTGATGCCAAATATTGGACATACTGTGCTGAGATTGCTCACAACGTTTCCACAAGGAAGAGGAAGGAAATCGTTGAGAGGGCTGCCCAGCTTGATGTCGTTGTGACCAACAAAACTGCCAGGCTACGCAGCCAGGAAGACGAATAG 258 0.5116 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKEEVQGMHFDAKYWTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2982 85 SMART Ribosomal_L32e_2 15 74 IPR001515 GO:0003735|GO:0005840|GO:0006412
Amo13g2982 85 Pfam Ribosomal protein L32 43 74 IPR001515 GO:0003735|GO:0005840|GO:0006412
Amo13g2982 85 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 43 85 IPR001515 GO:0003735|GO:0005840|GO:0006412
Amo13g2982 85 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 32 IPR001515 GO:0003735|GO:0005840|GO:0006412
Amo13g2982 85 PANTHER 60S RIBOSOMAL PROTEIN L32-1-LIKE 43 85 - -
Amo13g2982 85 PANTHER 60S RIBOSOMAL PROTEIN L32-1-LIKE 1 32 - -
Amo13g2982 85 SUPERFAMILY Ribosomal protein L32e 2 83 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2982 Amo-Chr13 75348166 75349839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2982 1 85 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 47.368 2.04e-29 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2982 K02912 - zju:107412873 97.8265