Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2967 ATGCAGCTTCCTCTCCTTGTCCTCCTCTGTGTCTTCTCCACCAAAATCGTCAACGCCTTCCTCTTCGACAATCCAGATCTGCCGCTAGGGATTCCATTCCGCAGGAGAGGAATTCCTTTGTCAACTTCCAAGCCAAAACCGGAGATTGCTTTCTTCGATGTTACTCGAACAGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATGTTTCTGAGGCCATGAAGGACCTAGCAATAACACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTGCTGTCTGTAAATTTGGGCATTTCCTGCGTGAACTATCTCACAAAACTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGAAAGTCATTGGACTCTTTTCTGGAGGCCTTAATGCAATGTCCACACTTTCTGTTATCGTAATAGTGGGATCTTCTGTATCTTCTATATCTTTTTTGTTAATTACAACCTGTCTAATAAGAATAAATGGCTACCGGAAACCTAGTTTGATTGCATTGTTTGATGTTGATGTCACTCTTATAGCCCCAAGGAAGGTATTTGTTCTTCTTGAGCCAATGGCATTAGTATTGTATAGATAA 663 0.4163 MQLPLLVLLCVFSTKIVNAFLFDNPDLPLGIPFRRRGIPLSTSKPKPEIAFFDVTRTGEILSRLSEDTQIIKNAATTNVSEAMKDLAITLMGLSFMFATSWKLTLLALAVVPVIAVCKFGHFLRELSHKTQTAAAVASSIAEKVIGLFSGGLNAMSTLSVIVIVGSSVSSISFLLITTCLIRINGYRKPSLIALFDVDVTLIAPRKVFVLLEPMALVLYR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2967 220 Pfam ABC transporter transmembrane region 48 145 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo13g2967 220 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 142 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo13g2967 220 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 46 143 - -
Amo13g2967 220 Gene3D ABC transporter type 1, transmembrane domain 46 158 IPR036640 GO:0005524|GO:0016021
Amo13g2967 220 SUPERFAMILY ABC transporter transmembrane region 49 165 IPR036640 GO:0005524|GO:0016021
Amo13g2967 220 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 46 143 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2967 Amo-Chr13 72762655 72764720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2967 48 145 Calmodulin-binding Proteins AT2G36910 30.693 3.84e-07 48.5