Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2952 ATGGAGTCAGAGACTGGTGATGATGTTCCCATTGTTGGGATGGAATTTGAATCTCTGGATGCAATAATCGAATTCTACGACACCTACCCAAGAAGAGTTGGTTTTGACTGGAGGAATAGGAATTCGAAAAAGAATGCCGATAAGGTTGTATACCATGTTATGCTTGTCTGCAACCGGGAGGGCAAAGCCGAATCAAAGGTTGATGAAACGAGGAAGACCTATCCAAAAGGACCTACAGGGTGTAAAGCCAGGATGATTGCCTCTTCCGATGTCGGCGGTAGTTGGATTATTAGGGTAGTTAAACTCGAACACTGTCACGATCTGAATTGCACTAATTCTAGCATATTGAGGAGAAATAAGGAGTTTGAAGACAATTGGACTGGTTTTGTGAATGCCTACTGTCTCGAGGATAACGAATGGTTGCAAGGGATGTGGAATGATTACAGATACTGGGTTCTAGTGTATCTGAAGGGTGACTTCTGGGCTGGAATATCATCCACTCAGAGAAACGAGAGCGTCCATTTTTTGTTTGACAAGTATCTGAATTCGCAGACAACCTTGGCCGAGGCCACAAAGGATTTTAACTCTCTGAATAAGGTTGTGCCATGTTGCTCCAACAGCGAGATTGAAGTGTAG 636 0.4371 MESETGDDVPIVGMEFESLDAIIEFYDTYPRRVGFDWRNRNSKKNADKVVYHVMLVCNREGKAESKVDETRKTYPKGPTGCKARMIASSDVGGSWIIRVVKLEHCHDLNCTNSSILRRNKEFEDNWTGFVNAYCLEDNEWLQGMWNDYRYWVLVYLKGDFWAGISSTQRNESVHFLFDKYLNSQTTLAEATKDFNSLNKVVPCCSNSEIEV* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2952 211 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
Amo13g2952 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 111 IPR031052 GO:0006355
Amo13g2952 211 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 118 188 IPR031052 GO:0006355
Amo13g2952 211 PANTHER OS03G0843700 PROTEIN 5 111 - -
Amo13g2952 211 PANTHER OS03G0843700 PROTEIN 118 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2952 Amo-Chr13 70868537 70869671 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g2952 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2952 - - aip:107640510 208.379