Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2937 ATGAAGCCGCATTCTTATCAAATCCGGCATTGTTATTTTGCCATTGCTCCCCCTCATCATCGGAAAATGGAGGATGTGGACCTTGACGGTGGCGGTGGCAGTGGTCGCAAGTATCGGCCTGTGTTGGACAGCGATCGTGCGGTGCTTGAGATGTCTTCAATGGATCCTGGATCCTCTTCCGCTGCTTCTTCTTCTCAACCGTTTCGGGATCAACCTCCTCCTAATCTCAGAAAAATAAACGTGGGTAATGGTGCTACTGAGGCTTCTAATGCTAAAGAAGGGAACAACTCTCCTAGTCAGCCACAGCCTAATGGATCCCATCAAGAATCAAAGCTTGAACTGTTTGGTTTTGATTCCCTTGTCAATATACTTGGTCTTAAAAGCATGACTAGTGAGCAAGCTGTGCAACCATCTAGTCCTAGAGAAGGCGAAGATATTTCTATCACTGTAGGGGAGCCAAAGGGCCATGTTTCTACTTTTATTGTTTCTTTTCATGTGGAAACGAAGGAGGAGATGACCTCCATGGCTGCAGCCAAGAAGGAAGAGGACCTGCCTGCTGCTCCCAAGCTGGGTACAATGATGGGTGTATTCATTCCATGCATACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGAATGGCTGGCATAGGAGAGTCATTTCTGCTTGTTGCTTTGTGTGGCTTGTGTACTTTTCTTACATCAATATCATTGAGTGCCATTGCGACTAATGGTGCTATGAAGGGAGGGGGGCCATACTATCTAATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTATATGTTTCTTCCTTGGGAATGCTGTTGCTGGAGCACTCTACGTATTGGGAGCTGTGGAAACATTTTTGAAAGCAGTTCCTAAAGCTGGGATTTTTAGAGAGACTGTCAGCCATGTTAATGGTACTGCAGTGACACCAATAGAAGCTCCAAGTTCTCATGATCTGCAAATTTATGGGATTGTTGTGACCATTCTTTTATGCTTTATTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCATTTCTCGTTCCTGTTTTATTCTCAGTCATCTGCATATTCTTGGGAATGTTTGTGGCTAAGAAGGATAAACCTTCAGAGGGATTTACTGGTTTGAGTTGGGAGACAATTAAAGATAATTGGAGTTCAGATTATCAAAAAACTAATGATGCTGGAATCCCAGAAACTGATGGCCATGTAAGCTGGAATTTCAATTCATTAGTAGGCCTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCTAATAGATCAGCTTCTCTAAAAGATACTCAGCAATCAATTCCTATTGGGACATTATCTGCAACACTTATTACTACTTCTCTGTATTTTATTTCTGTGTTATTTTTTGGCGCTCCAATGATGATATTTTACCTATTCTGCGCTACTTTAAAGTTGCAGATGGCAGTGACCCTTTTCACTGCTATCCTATGTGGTGTGTGTGTCATTATTGGGAATCTGGATCTTATCACTCCAACTATAACTATGTTTTTCCTTCTATGTTATACGGGTGTCAACTTGTCCTGCTTCCTTCTTGATCTTCTAGATGCTCCTAGTTGGCAACCTCGTTGGAAATTTCATCATTGGTTTCTCTCTCTTGTTGGAGCATTACTTTGCATTGTGATTATGTTCCTGATCTCGTGGTCATTCACTGTGGTGGCTTTGGCCCTTGCAAGTCTTATATATAAGTATGTGGGCCTCAAAGGAAAGGCTGGCGACTGGGGAGATGGTTTCAAAAGTGCATATTTCCAACTAGCACTTCGGAGCCTTCGATCACTAGGAGAAAACCAAGTACACCCAAAGAATTGGTATCCAATTCCACTCGTGTTTTGCCGGCCCTGGGGTCAACTACCAGAAAATGTTCCATGTCATCCCAAACTTGCAGATTTTGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCTATATTTGTCTCTATACTGGATGGAGACTACCATGAATGTGCTGAAGATGCCAAGACTGCTTGTAAACAGCTCAGTACCTACATTAATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTCGCCCCTAATATGTCTGAAGGCTTTCGTGGTATCGTTCAGACAATGGGCCTTGGGAATCTCAAGCCAAACATTGTGGTGATGCGCTACCCAGAGATCTGGCGTCGGGAGAACTTAACAGAAATCCCCAAGACATTTGTTGGGATAATTAATGACTGCATTGTTGCAAACAAGGCGGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCCAATGAGTACCAGAAGCAGTACGGCACGATTGACCTCTACTGGATTGTGAGAGATGGTGGTCTCATGCTGCTGCTCTCTCAGCTGCTTCTTACCAAGGACAGCTTTGAGAGTTGCAAAATTCAGGTTTTCTGCATTGCAGAAGAGGATGCAGATGCAGAAGTGCTGAAAGCTGATGTGAGAAAATTCCTTTATGATCTTCGGATGCAAGCAGAAGTCTTTGTCATTCCCATTTCTTCACAAGAAAATGGTGGGTCTCCCCAGGATGAGTCACACGATGCATTTAAAGGTGCTCAACAAAGAATTGATGATTATCTAAACAAAATGAAGGCAGCAGCAAAGAAAGATGGCACCCCTCTAATGGCAGATGGTAAGCGCGCAGTTGTGAATGAGCAGCAGGTCGAGAAGTTCCTGTTCACAACGCTTAAGCTCAATTCAATAATGTTGAGGTACTCAAGAATGGCTGCTGTTGTTTTGGTAAGTTTGCCTCCACCTCCACTGAACCACCCAGCATATTTCTATATGGAGTACATGGATATGTTGCTGGAAAATATACCGAGGATTTTAATTGTAAGAGGATACCGTAGAGACGTTGTCACTCTATTCACATAG 2934 0.4325 MKPHSYQIRHCYFAIAPPHHRKMEDVDLDGGGGSGRKYRPVLDSDRAVLEMSSMDPGSSSAASSSQPFRDQPPPNLRKINVGNGATEASNAKEGNNSPSQPQPNGSHQESKLELFGFDSLVNILGLKSMTSEQAVQPSSPREGEDISITVGEPKGHVSTFIVSFHVETKEEMTSMAAAKKEEDLPAAPKLGTMMGVFIPCIQSILGIIYYIRFSWIVGMAGIGESFLLVALCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGICFFLGNAVAGALYVLGAVETFLKAVPKAGIFRETVSHVNGTAVTPIEAPSSHDLQIYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLFSVICIFLGMFVAKKDKPSEGFTGLSWETIKDNWSSDYQKTNDAGIPETDGHVSWNFNSLVGLFFPAVTGIMAGSNRSASLKDTQQSIPIGTLSATLITTSLYFISVLFFGAPMMIFYLFCATLKLQMAVTLFTAILCGVCVIIGNLDLITPTITMFFLLCYTGVNLSCFLLDLLDAPSWQPRWKFHHWFLSLVGALLCIVIMFLISWSFTVVALALASLIYKYVGLKGKAGDWGDGFKSAYFQLALRSLRSLGENQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKTACKQLSTYINYKNCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPKTFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKDSFESCKIQVFCIAEEDADAEVLKADVRKFLYDLRMQAEVFVIPISSQENGGSPQDESHDAFKGAQQRIDDYLNKMKAAAKKDGTPLMADGKRAVVNEQQVEKFLFTTLKLNSIMLRYSRMAAVVLVSLPPPPLNHPAYFYMEYMDMLLENIPRILIVRGYRRDVVTLFT* 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2937 977 MobiDBLite consensus disorder prediction 53 71 - -
Amo13g2937 977 Pfam Amino acid permease 195 476 IPR004841 GO:0016020|GO:0055085
Amo13g2937 977 Pfam Amino acid permease 492 609 IPR004841 GO:0016020|GO:0055085
Amo13g2937 977 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 491 976 - -
Amo13g2937 977 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 29 156 - -
Amo13g2937 977 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 181 477 IPR004842 GO:0006811|GO:0015377|GO:0016021
Amo13g2937 977 MobiDBLite consensus disorder prediction 82 109 - -
Amo13g2937 977 Gene3D Amino acid/polyamine transporter I 188 483 - -
Amo13g2937 977 Gene3D Amino acid/polyamine transporter I 485 595 - -
Amo13g2937 977 MobiDBLite consensus disorder prediction 52 109 - -
Amo13g2937 977 MobiDBLite consensus disorder prediction 22 41 - -
Amo13g2937 977 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 491 976 IPR004842 GO:0006811|GO:0015377|GO:0016021
Amo13g2937 977 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 29 156 IPR004842 GO:0006811|GO:0015377|GO:0016021
Amo13g2937 977 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 181 477 - -
Amo13g2937 977 Coils Coil 869 889 - -
Amo13g2937 977 Pfam Solute carrier family 12 648 769 IPR018491 GO:0006811|GO:0016020|GO:0022857
Amo13g2937 977 Pfam Solute carrier family 12 780 976 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2937 Amo-Chr13 68291027 68308210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2937 476 977 Inorganic Solute Cotransporters AT1G30450 81.349 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2937 K14427 - gmx:100795205 1432.54