Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2914 ATGGCATCCCTTCTCCCTTCTCCCTTCTCCCTCACTCTCATCAAGCAAATTGGAAGAGGAGCATTTGGTTCTACTTTTCTGGAAATATATCTTCTGAGTCAATTTGAACATGAGAACATAGTTAGATATCTTGGCACAGACAAGGACAATAACATGCTATACATCTTTCTCGAGCTTGTAACAAAAGTATCATTGGCAAGTCTTTATAGAAAGTATCATTTAAAGGATTCTCAGGTTTCGGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAACGTGATTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGTGAAGCTTGCATACATGTAA 366 0.3852 MASLLPSPFSLTLIKQIGRGAFGSTFLEIYLLSQFEHENIVRYLGTDKDNNMLYIFLELVTKVSLASLYRKYHLKDSQVSAYTRQILSGLKYLHDRNVIHRDIKCANILVDANGSVKLAYM* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2914 121 SUPERFAMILY Protein kinase-like (PK-like) 12 119 IPR011009 -
Amo13g2914 121 Gene3D Transferase(Phosphotransferase) domain 1 10 120 - -
Amo13g2914 121 SMART serkin_6 11 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2914 121 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 28 119 - -
Amo13g2914 121 Pfam Protein kinase domain 25 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2914 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2914 121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Amo13g2914 121 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 28 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2914 Amo-Chr13 66116644 66118071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2914 28 119 MAP Kinase Kinase Kinase AT4G08500 73.913 1.75e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo13g2914 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2914 - K13414 gmx:100806902 162.925