Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo13g2892 | ATGGAGGGCGTCACTGTGGTGAAGCCAGAGGCCGAGGAGGTTACAGGGGAAGTGCAGAAAGACCAGGAACTGGTTCTAGAATCTTCTCACCCTGTTGTGGAGGACAGTGTTGATAGAGTTAGCAGCACTGACATGGAGGAACAACAGCTCCAGAACAACAACGTTGGTGATGATAACAAGTCATTGCCAGCTTCTGGACTTAATGCTGTAATTTCTAGCCCAAGCCAACTTACCATCTTCTATAATGGAAGTGTCTGTGTGTATGATGGACTCCCTGCTGACAAGGTGCATGAAATAATGCTTATTGCTGCTGCTACTGCAAAGTCAGCTGAAATGAAGAAGATTAATCCACAGTCTCCTTTTGTTTCAGCTGTTCCCACAAGGCCTTCTTCGCCACATGCAACCTCCAATAATGTTGCTTCTCCTCAGTCAATCTGCTTCCCTGCGGAGAAGAATTCCATCTGCAGGCTGCAAGAGTTCCCAATAGCACGCAGGCATTCACTGCAAAGGTTTCTTGAGAAGCGTCGAGACAGGTTGGGGAGCAAAGCCCCGTATCCTACCTTGTCAACAACAAAAATGGCTGACAACATAGAGAACAACTTCAGTGCCGACAATGCACCGGATTTGGTTAAGCGATCAGAAGAGGAGTTGCAGCCAACTGTAGCTGCCTCTTGA | 675 | 0.477 | MEGVTVVKPEAEEVTGEVQKDQELVLESSHPVVEDSVDRVSSTDMEEQQLQNNNVGDDNKSLPASGLNAVISSPSQLTIFYNGSVCVYDGLPADKVHEIMLIAAATAKSAEMKKINPQSPFVSAVPTRPSSPHATSNNVASPQSICFPAEKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPTLSTTKMADNIENNFSADNAPDLVKRSEEELQPTVAAS* | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo13g2892 | 224 | Pfam | Jas motif | 161 | 185 | IPR018467 | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 121 | 140 | - | - | |
Amo13g2892 | 224 | PANTHER | DIVERGENT CCT MOTIF PROTEIN | 35 | 204 | - | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 26 | 42 | - | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 181 | 224 | - | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
Amo13g2892 | 224 | Pfam | tify domain | 73 | 104 | IPR010399 | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 26 | 60 | - | - | |
Amo13g2892 | 224 | SMART | tify_2 | 70 | 105 | IPR010399 | - | |
Amo13g2892 | 224 | MobiDBLite | consensus disorder prediction | 43 | 60 | - | - | |
Amo13g2892 | 224 | ProSiteProfiles | Tify domain profile. | 70 | 105 | IPR010399 | - | |
Amo13g2892 | 224 | PANTHER | PROTEIN TIFY 4A-RELATED-RELATED | 35 | 204 | IPR040390 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo13g2892 | Amo-Chr13 | 64016309 | 64021202 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo13g2892 | 74 | 187 | Tify Gene Family | AT5G20900 | 51.724 | 4.67e-32 | 113 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Tify | Amo13g2892 | tify | 6.1e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo13g2892 | K13464 | - | gmx:100306045 | 251.521 |