Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2887 ATGGGACACACCAACATTTGGAACTCTCACCCAAAGAACTACGGGCCTGGTTCTCGCACTTGTCGCGTGTGTGGAAACCCACATGGATTAATCAGGAAGTATGGCCTCATGTGCTGCAGGCAGTGCTTCCGTAGCAATGCCAAGGAAATCGGATTCATTAAGTACCGCTGA 171 0.5029 MGHTNIWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2887 56 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
Amo13g2887 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 - -
Amo13g2887 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Amo13g2887 56 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 49 - -
Amo13g2887 56 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2887 Amo-Chr13 63893682 63895815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2887 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 89.286 3.99e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2887 K02980 - sind:105169365 130.183