Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2834 TGTCGCTGCCTCCCTCACCAGCCAGCCCCAACACCATCGCTGCGTCCATCACAAGCCAACCTCAGTGCCGTCGCTGCTTCCCTCAGCAGCCACCCTCACCGGCATCACTCACTCCCTCGCCAGACACTCTCACCAGCGCCGAATTTGTTCTCCTTCTTTTACACGCAAATTGATCTGAAAAGTATAAGAAACTTTGCAAAAATAATAGGAACAGTTTGCTACGTGAATGGAGCATTAACCATGGCTCTGGTGAAAGGACATAAGCTCTTAAACATAGACTACTTTTCTCATCATAATACTGCCAAACACATTCTCACTGTTGTTGATGACACGTGGCTTCTTGGCTGCCTATTACTCTTAGCAAGTAGTGTTTTCTGGTCTTCTTGGATTACTATCTGTCCAGACCATTTGTTATCAACTTTTTGGATGTGTTTATTTGCGGCGGTTCAATTAGCCATATTTGCACTAGTCTATGAACATGATCTAAAACCATGGAGTTTGCATTCTGGCACAGAATTTTCATGCTGTCTATATGCAATA 540 0.4426 CRCLPHQPAPTPSLRPSQANLSAVAASLSSHPHRHHSLPRQTLSPAPNLFSFFYTQIDLKSIRNFAKIIGTVCYVNGALTMALVKGHKLLNIDYFSHHNTAKHILTVVDDTWLLGCLLLLASSVFWSSWITICPDHLLSTFWMCLFAAVQLAIFALVYEHDLKPWSLHSGTEFSCCLYAI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2834 180 PANTHER WAT1-RELATED PROTEIN 53 179 IPR030184 GO:0016021|GO:0022857
Amo13g2834 180 PANTHER WAT1-RELATED PROTEIN 53 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2834 Amo-Chr13 61836756 61837401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2834 49 179 Nodulin-like Gene Family AT4G30420 41.549 1.65e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2834 - - gmx:100817369 135.961