Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2817 ATGCTTCTTTACCGCTTCCTTGTGAGGAGGACCGGCAGCAATTTCAATGCTGTGATACTGAAACGCTTGTTCGTGAGCAAGGAAGGTAAAATTGCCGTGGTAGTGGGAACTGTAACTGATGATATCAAAGTGTATGAAGTTCTTGCATTGAAGGTTACTACACTCAGGTTTATAGAGACTGCATGTGCTAGAATAGAGAAGGTTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCACCTCTCGGACAGAACGTAGTCCTTCTTAGAGGCCCAAAGAAGTCCAAGGAAGCTGTGAAACACTTTGGTCCTGCTCTTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACAATCTAAGGGAAGGAAGTATGAGAGGACTAGAGGAAGGAGGAATAGCAAAGGACTTAGGGTTGAGAAGCTTGTTGAGAAATCAGAGTTTTGA 450 0.4467 MLLYRFLVRRTGSNFNAVILKRLFVSKEGKIAVVVGTVTDDIKVYEVLALKVTTLRFIETACARIEKVGGECLTFDQLALRAPLGQNVVLLRGPKKSKEAVKHFGPALGVPHSHTKPYVQSKGRKYERTRGRRNSKGLRVEKLVEKSEF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2817 149 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 27 139 - -
Amo13g2817 149 PANTHER 60S RIBOSOMAL PROTEIN L18 3 28 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo13g2817 149 MobiDBLite consensus disorder prediction 106 137 - -
Amo13g2817 149 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 3 28 - -
Amo13g2817 149 PANTHER 60S RIBOSOMAL PROTEIN L18 27 139 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo13g2817 149 SUPERFAMILY Ribosomal proteins L15p and L18e 3 92 IPR036227 -
Amo13g2817 149 Pfam Ribosomal protein 60S L18 and 50S L18e 27 139 IPR021131 -
Amo13g2817 149 Gene3D - 27 139 - -
Amo13g2817 149 Gene3D - 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2817 Amo-Chr13 59998729 59999885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2817 23 140 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 72.034 4.88e-62 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2817 K02883 - cpap:110808129 231.876