Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2790 ATGGAGGGGACCGAGGAGGTTTCATCTAATTTTCAGGAGAATGTCACTCCAGGGGTGGACGAGGACCCGATAGAAAATGAAACCTTTGTTGCAGAAACAGAATCCGTTCCGATTGGTGCTAGTCATTCAGACGATCAAAGAGATGTCATCGTTCTTGACGGAATAGGTTCGTTTGGGACAATTGATTTTGATGCGTTGCGAGCTGAGGAGATTATGATGATAGAGTTTGTGGATTTGAAAACTGCTTACGACTTCTATAACGAGTACGGTGAACGAGATGCAAAGCATGTTCACAGAAATGATAGGAAGATGGATCCTAGACCAGTAACGCGATGTGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCAAGGAACGGGAGATGGTACGTTGAGTTCTTCTCGGATGAACATAACCATGAAATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAG 585 0.4496 MEGTEEVSSNFQENVTPGVDEDPIENETFVAETESVPIGASHSDDQRDVIVLDGIGSFGTIDFDALRAEEIMMIEFVDLKTAYDFYNEYGERDAKHVHRNDRKMDPRPVTRCGCNARIKVHVDSRNGRWYVEFFSDEHNHEMLEARFRGMMRSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQSGGFEMVGFQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2790 195 MobiDBLite consensus disorder prediction 1 16 - -
Amo13g2790 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 101 163 - -
Amo13g2790 195 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g2790 195 Pfam FAR1 DNA-binding domain 90 143 IPR004330 -
Amo13g2790 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 101 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2790 Amo-Chr13 58939648 58940440 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g2790 FAR1 8.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2790 - - adu:107488338 357.836