Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2782 ATGAAGATGAAGACCAAAACACCATTGAAGCAGCTCAAGCTTGCTGTTCCTGCTCAAGAAACACCCATCACTTCATTCCTGACTGCAAGTGGCACGTTCCATGATGGAGATCTGCTGTTAAATCAGAAAGGACTGCGTCTCATATCTGAAGAGAAAGAATCAAGGCCTTCTGATGGTAAGGAACTGGAATTCGATTTCTCCCTTGATGACCTTGAGACCATCAAAGTGATTGGAAAAGGTAGTGGTGGCGTAGTACAACTTGTTCAACATAAGTGGGTTGGAAGATTGTTTGCTCTGAAGGTCATTCAGATGAACATACAAGAGGAGATTCGAAAACAGATTGTTCAGGAACTGAAAATAAACCAAGCTTCACAATGTCCACATGTTGTGGTTTGTTACCACTCATTCTACCATAACGGAGTTATATCGCTTGTCTTAGAATACATGGATCGCGGTTCTCTGGCAGATGTAGTCAGACAAGTTAAAACAATTCTGGAACCATATCTTGCCGTGGTTTGTAAGCAGGTGTTACAAGGTCTTGTTTACTTGCATAATGAGAGACATGTGATACATAGGGACATCAAACCATCCAACCTATTAGTCAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGCGTTAGTGCTATGTTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTCGGAACTTACAACTACATGTCGCCAGAAAGAATTAGTGGGAGCACTTATGATTGTAGCAGTGATATCTGGAGTTTGGGCTTGGTAGTACTTGAGTGCGCCATAGGAAGGTTTCCTTACATACAATCCGAGGATCAGCAATGCTCCCCTAGTTTCTATGAGCTTCTGGAAGCAATTGTCGAAAGGCCTCCACCTTCGGCTCCGGCAGATCAATTCTCTCCAGAGTTCTGTTCATTTGTATCATCCTGCATCCAAAAAGATCCACGGGATAGATTGACATCCTTGGAGCTTCTGGACCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTTGATCTTGGAATTTTAGTAGGTAGCTTGGAACCCCCTGTAAATTTTGCTAGATAA 1071 0.422 MKMKTKTPLKQLKLAVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDGKELEFDFSLDDLETIKVIGKGSGGVVQLVQHKWVGRLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDCSSDIWSLGLVVLECAIGRFPYIQSEDQQCSPSFYELLEAIVERPPPSAPADQFSPEFCSFVSSCIQKDPRDRLTSLELLDHPFIKKFEDKDLDLGILVGSLEPPVNFAR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2782 356 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Amo13g2782 356 CDD PKc_MAPKK_plant_like 69 335 - -
Amo13g2782 356 SMART serkin_6 71 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2782 356 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2782 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 355 - -
Amo13g2782 356 SUPERFAMILY Protein kinase-like (PK-like) 68 343 IPR011009 -
Amo13g2782 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Amo13g2782 356 PIRSF ILK 3 328 - -
Amo13g2782 356 Gene3D Phosphorylase Kinase; domain 1 40 150 - -
Amo13g2782 356 Pfam Protein kinase domain 72 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2782 356 Gene3D Transferase(Phosphotransferase) domain 1 152 345 - -
Amo13g2782 356 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 3 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2782 Amo-Chr13 58721740 58725945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2782 3 356 MAP Kinase Kinase Gene Family AT5G56580 85.070 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Amo13g2782 Pkinase 5.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2782 K04368 - gmx:100786284 678.322