Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo13g2782 | ATGAAGATGAAGACCAAAACACCATTGAAGCAGCTCAAGCTTGCTGTTCCTGCTCAAGAAACACCCATCACTTCATTCCTGACTGCAAGTGGCACGTTCCATGATGGAGATCTGCTGTTAAATCAGAAAGGACTGCGTCTCATATCTGAAGAGAAAGAATCAAGGCCTTCTGATGGTAAGGAACTGGAATTCGATTTCTCCCTTGATGACCTTGAGACCATCAAAGTGATTGGAAAAGGTAGTGGTGGCGTAGTACAACTTGTTCAACATAAGTGGGTTGGAAGATTGTTTGCTCTGAAGGTCATTCAGATGAACATACAAGAGGAGATTCGAAAACAGATTGTTCAGGAACTGAAAATAAACCAAGCTTCACAATGTCCACATGTTGTGGTTTGTTACCACTCATTCTACCATAACGGAGTTATATCGCTTGTCTTAGAATACATGGATCGCGGTTCTCTGGCAGATGTAGTCAGACAAGTTAAAACAATTCTGGAACCATATCTTGCCGTGGTTTGTAAGCAGGTGTTACAAGGTCTTGTTTACTTGCATAATGAGAGACATGTGATACATAGGGACATCAAACCATCCAACCTATTAGTCAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGCGTTAGTGCTATGTTGGCAAGCTCAATGGGCCAAAGAGATACATTTGTCGGAACTTACAACTACATGTCGCCAGAAAGAATTAGTGGGAGCACTTATGATTGTAGCAGTGATATCTGGAGTTTGGGCTTGGTAGTACTTGAGTGCGCCATAGGAAGGTTTCCTTACATACAATCCGAGGATCAGCAATGCTCCCCTAGTTTCTATGAGCTTCTGGAAGCAATTGTCGAAAGGCCTCCACCTTCGGCTCCGGCAGATCAATTCTCTCCAGAGTTCTGTTCATTTGTATCATCCTGCATCCAAAAAGATCCACGGGATAGATTGACATCCTTGGAGCTTCTGGACCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTTGATCTTGGAATTTTAGTAGGTAGCTTGGAACCCCCTGTAAATTTTGCTAGATAA | 1071 | 0.422 | MKMKTKTPLKQLKLAVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDGKELEFDFSLDDLETIKVIGKGSGGVVQLVQHKWVGRLFALKVIQMNIQEEIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDCSSDIWSLGLVVLECAIGRFPYIQSEDQQCSPSFYELLEAIVERPPPSAPADQFSPEFCSFVSSCIQKDPRDRLTSLELLDHPFIKKFEDKDLDLGILVGSLEPPVNFAR* | 357 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo13g2782 | 356 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524 | |
Amo13g2782 | 356 | CDD | PKc_MAPKK_plant_like | 69 | 335 | - | - | |
Amo13g2782 | 356 | SMART | serkin_6 | 71 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo13g2782 | 356 | ProSiteProfiles | Protein kinase domain profile. | 71 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo13g2782 | 356 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 3 | 355 | - | - | |
Amo13g2782 | 356 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 343 | IPR011009 | - | |
Amo13g2782 | 356 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Amo13g2782 | 356 | PIRSF | ILK | 3 | 328 | - | - | |
Amo13g2782 | 356 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 150 | - | - | |
Amo13g2782 | 356 | Pfam | Protein kinase domain | 72 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo13g2782 | 356 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 345 | - | - | |
Amo13g2782 | 356 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 | 3 | 355 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo13g2782 | Amo-Chr13 | 58721740 | 58725945 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo13g2782 | 3 | 356 | MAP Kinase Kinase Gene Family | AT5G56580 | 85.070 | 0.0 | 634 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE7 | Amo13g2782 | Pkinase | 5.9e-66 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo13g2782 | K04368 | - | gmx:100786284 | 678.322 |