Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2780 ATGGTCATGGCCCTATCCATTTCCTCCACTGCATTATCAAGTCTTCCAAGCAGAGAGATACGGCAAAAGGTTGTTCATCATGAAAGAACAACGACGTTGTTTCCAAGAACAATTCTAACAAATGCAACAAAAGGAGTGTCAAGTGTGTGTGAACCACTTCCTCCAGATAGACCATTGTGGTTTCCTGGTAGTTCCCCTCCTCAGTGGCTTGATGGCAGTCTTCCTGGTGATTTTGGTTTTGACCCACTTGGATTAGGGTCGGATCCAGAGTTGTTGAAATGGTTTGCACAGGCAGAGCTAATGCACGCAAGATGGGCAATGCTTGGTGTATCAGGAATCCTGATCCCAGACCTTCTTCAAAAAATGGGCTTCCTTCACAACTTCTCTTGGTACGACGCCGCAACAAGGGAATATTTTGCGGACCCAACAACCCTCTTCATTGTCCAGATGGCCTTGATGGGCTGGGTTGAGGGTAGGAGATGGGCCGACATGCTCAACCCAGGCTCCGTTGACATTGACCTCAAGCTGCCACACATAACAAAGCCCAAGCCCGATGTTGGGTACCCCGGTGGGTTTTGGTTTGACCCAATGATGTGGGGGAGAGGCTCCCCTGAGCCCGTTATGGTCCTCAGGACTAAGGAGATCAAGAATGGTAGGCTTGCCATGCTTGCATTTGTTGGGTTTTGGTTCCAGGCTATTTATACCGGGGAAGGCCCTATTGATAACTTGATGGCTCATATCGCTGACCCCGGTCACTGCAACATTTTCTCGGCTTTCACGTCGCATTAG 789 0.493 MVMALSISSTALSSLPSREIRQKVVHHERTTTLFPRTILTNATKGVSSVCEPLPPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPDLLQKMGFLHNFSWYDAATREYFADPTTLFIVQMALMGWVEGRRWADMLNPGSVDIDLKLPHITKPKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGHCNIFSAFTSH* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2780 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 259 IPR001344 GO:0009765|GO:0016020
Amo13g2780 262 SUPERFAMILY Chlorophyll a-b binding protein 56 261 - -
Amo13g2780 262 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 3 259 - -
Amo13g2780 262 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Amo13g2780 262 Gene3D Chlorophyll a/b binding protein domain 67 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2780 Amo-Chr13 58166212 58171236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2780 55 260 Chloroplast and Mitochondria Gene Families AT3G61470 66.990 5.15e-103 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2780 13 58166212 58171236 Amo13g2780 13 58166212 58171236 ECH
Amo13g2780 13 58166212 58171236 Amo03g1464 03 37729258 37733833 hybridization