Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2779 ATGCATCATGATCTCAAACCAGCAAACATTCTCTTGGACAAGAATTACGCCATCAAAATCACAGACATTGGTCTGGCAAGTAGTGGACAGCGTCACACAATCCAACCTGCTATGGGACTTTCTTACCAAGTTAGGAGGGCAATTGCAAAGGAAAAATTTGAAGATATACTTGTTCATGTGGTGCTTGATTGGCCAGTTGAGAAAGCTGTAGGATTTGCCAAGTTGGCATTAGCCTATTGTGAGCTCAGGAAAGGACAGGCCGAATTTCGCAACTATTGTGTTTCTAGAGCTTCCTGGCTAACAGAATTTGGAAGAACTCAAACAATGTTGTCAATAGGAGCTAGTGTTTATAACACTCAAGTGAAAAAGGAGGCACAGAATTTCTGCTTTGCAAAGAAAAGTATAACTAGATCTGCATAA 420 0.4071 MHHDLKPANILLDKNYAIKITDIGLASSGQRHTIQPAMGLSYQVRRAIAKEKFEDILVHVVLDWPVEKAVGFAKLALAYCELRKGQAEFRNYCVSRASWLTEFGRTQTMLSIGASVYNTQVKKEAQNFCFAKKSITRSA* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2779 139 PANTHER OS02G0152300 PROTEIN 33 111 - -
Amo13g2779 139 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 26 - -
Amo13g2779 139 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 33 111 - -
Amo13g2779 139 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Amo13g2779 139 PANTHER OS02G0152300 PROTEIN 2 26 - -
Amo13g2779 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2779 139 SUPERFAMILY Protein kinase-like (PK-like) 1 32 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2779 Amo-Chr13 58157731 58158499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2779 1 84 Receptor kinase-like Gene Family AT5G12000 38.931 1.09e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo13g2779 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2779 - - adu:107461003 97.0561