Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2755 ATGGAAGATCGCTACTCTGCTGCTGATAACCTACGCGGACAACAAAAACTGCCATTTTTTGGAATTTTTGATGGGCACGGTGGTGCAAAGGCTGCCAAATTTGTGGCAAATAACTTAGAAAAGAATGTGTTAGATGAAGTGATTCTTACCGAAGAAGATAGCATTAAGGAGGCTGTGAAGCACGGTTATGTCAAGACTGATTCTGCTTTCTTGAAAACTGTGGTAGTGCTCCGCTGCTGCTAG 243 0.4321 MEDRYSAADNLRGQQKLPFFGIFDGHGGAKAAKFVANNLEKNVLDEVILTEEDSIKEAVKHGYVKTDSAFLKTVVVLRCC* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2755 80 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 76 - -
Amo13g2755 80 ProSiteProfiles PPM-type phosphatase domain profile. 1 80 IPR001932 -
Amo13g2755 80 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
Amo13g2755 80 PANTHER PROTEIN PHOSPHATASE 2C 1 76 IPR015655 GO:0004722|GO:0006470
Amo13g2755 80 Gene3D - 1 78 IPR036457 -
Amo13g2755 80 SUPERFAMILY PP2C-like 1 76 IPR036457 -
Amo13g2755 80 Pfam Protein phosphatase 2C 1 70 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2755 Amo-Chr13 57421854 57422492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2755 1 72 PP2C-type Phosphatase Gene Family AT2G30020 57.534 1.18e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2755 K17506 - aip:107607425 163.31