Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2747 ATGGGAAAAATGCCTTCCATTTTATTCTTCTGCTTCCTCCTCTGCCTCTCACATTCTTCTTCTTCTTCATCTTCCTTAGAATCACCTATTAATAATGTGGCAAAGAAGAAAACCTACATTGTTCACATGAACCACAACCAAAAGCCTTCCATATATTCCACCCACCATGACTGGTACATCGCAAGCCTTCAATCTCTCTCAACTAATTCAGATTCAGATTCGGATCCACTTCTCTATTCCTACAAAACAGCTTACAACGGTTTTGCTGCCTCTCTCGACCCACAACAGGCCCAGGCCCTTCTCGCCTCGGGCTCAGTCCTTGGCCTCTACGAGGACACACTCTACCAACTCCACACTACACGAACACCCGAGTTCCTTGGCCTCGAAACCCAAACCACCCTGTGGGCCGGCCACAGTACCGAGGACCTAGGACGGGCTCTAAATGACGTCATTATCGGCGTACTCGACACCGGCGTCTGGCCCGAATCCAAAAGCTTCGATGACGCAGGAATGCCTGAGATCCCAGCCCGGTGGCGCGGACAATGCGAATCAGGCCCGGACTTCTCTCCAAAACTCTGCAACAAGAAGCTCATCGGGGCACGAAGCTTCTCCAGAGGGTTCCACATGGCGTCCGGAAATTCCGGAAGCGGTTACCCAGGGAGACAGAAGGAGCCTGTGTCCCCACGCGACAAAGACGGCCATGGAACCCACACGGCGAGCACAGCAGCGGGCTCGCCGGTGGCTAACGCAAGCCTTTTAGGATACGCCACCGGAACGGCCCGTGGGATGGCCCCGCAGTCCCGCGTGGCGGCCTACAAGGTTTGTTGGACCGACGGCTGTTTCGCCTCCGACATTCTCGCCGGAATAGATCGTGCAATTGAAGACGGCGTGGACGTGCTCTCGCTCTCCCTCGGTGGCGGCTCCGCCCCTTACTTCCGTGACACAATCGCGATAGGCGCGTTTGCGGCGGTTGAGAAAGGGATCTTCGTGGCATGCTCCGCGGGGAACAGTGGACCCAGTAAGAGCACACTTGCCAACGTGGCACCGTGGATTATGACCGTTGGGGCAGGTACACTTGACCGTGACTTCCCGGCTTTTGCGGTTCTTGGTAACAAGAAGGGGTTTTCTGGGGTTTCGCTTTATAGTGGGAAAGGGATGGGAACTGAACCGGTCAGTTTGGTTTATTTTAAGAATTCGAACCAGTCTAGTAGCATTTGTCTGCCCGGTTCGCTTGACCCGGCTTTGGTGAAGGGAAAAGTGGTTCTTTGCGATAGGGGGATGAATGCGAGGGTTGAGAAGGGACAGGTTGTGAGGGACGCCGGTGGTGTCGGGATGATTCTTGCGAACACGGCAGAGAGTGGGGAGGAGTTGGTGGCCGATAGTCATTTGTTGCCGGCGGTGGCAGTTGGGAGGATTGTTGGGGACCAGATCAGGGAGTATGTCGGGTCGGATCCGAAGGCGACAGCGGTTTTGAGCTTCGGTGGGACGGTTTTGAACGTTAGGCCGTCGCCTGTTGTGGCTGCTTTCAGTTCGAGAGGGCCCAATACCGTGACGAGGCAGATACTGAAACCTGATGTTATTGGGCCTGGTGTCAATATTCTCGCTGCTTGGTCAGAAGCCATTGGGCCCTCTGGGCTGGCTCAGGACACTCGCAAGACTAAGTTCAACATTATGTCAGGTACTTCAATGTCATGTCCGCACATAAGTGGGTTGGCTGCGTTGCTGAAAGCAGCTCACCCAGAATGGAGTCCCAGTGCAATCAAATCGGCACTCATGACGACAGCCTACACCCGCGACAACACCCGGTCGCTACTCCATGATGCCGCCGAAGGCTCGTTCTCCAACCCATGGGCTCACGGTTCAGGCCACGTCAACCCACAGAAGGCTCTCTCCCCTGGGCTTGTCTATGATGCCTCCACAAGTGACTACGTTAAATTCTTGTGTTCCTTGGGCTATAGCCCAGAACAATTGCAAATCTTAATCAAGCATTCCGGTTTCAATTGCACCAAGAAGTTCTCTGACCCTGGCCAATTAAATTACCCTTCATTCTCGGTCATGTTTGGTGGCAAGAGGGTTGTCCGGTACACACGGAGGCTGACCAATGTTGGCGAGGCCGGTTCGGTTTACAATGTGACCGTGAATGTCCCGCCGGCTGTGAGTGTAACAGTGAAGCCCACCAGGCTTGTGTTTGGAAAAGTAGGGGAGAGTAAAACGTACACTGTGACGTTTGTTTCCAAGAAGGGTACAAAAAATAAAGCTAGGTATGGGTTTGGTAGCATTGCGTGGAGCAATGCCTATCACCAAGTTAAAAGCCCAGTAGCTTTTGCTTGGACAACGTTGTGA 2343 0.5365 MGKMPSILFFCFLLCLSHSSSSSSSLESPINNVAKKKTYIVHMNHNQKPSIYSTHHDWYIASLQSLSTNSDSDSDPLLYSYKTAYNGFAASLDPQQAQALLASGSVLGLYEDTLYQLHTTRTPEFLGLETQTTLWAGHSTEDLGRALNDVIIGVLDTGVWPESKSFDDAGMPEIPARWRGQCESGPDFSPKLCNKKLIGARSFSRGFHMASGNSGSGYPGRQKEPVSPRDKDGHGTHTASTAAGSPVANASLLGYATGTARGMAPQSRVAAYKVCWTDGCFASDILAGIDRAIEDGVDVLSLSLGGGSAPYFRDTIAIGAFAAVEKGIFVACSAGNSGPSKSTLANVAPWIMTVGAGTLDRDFPAFAVLGNKKGFSGVSLYSGKGMGTEPVSLVYFKNSNQSSSICLPGSLDPALVKGKVVLCDRGMNARVEKGQVVRDAGGVGMILANTAESGEELVADSHLLPAVAVGRIVGDQIREYVGSDPKATAVLSFGGTVLNVRPSPVVAAFSSRGPNTVTRQILKPDVIGPGVNILAAWSEAIGPSGLAQDTRKTKFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTRDNTRSLLHDAAEGSFSNPWAHGSGHVNPQKALSPGLVYDASTSDYVKFLCSLGYSPEQLQILIKHSGFNCTKKFSDPGQLNYPSFSVMFGGKRVVRYTRRLTNVGEAGSVYNVTVNVPPAVSVTVKPTRLVFGKVGESKTYTVTFVSKKGTKNKARYGFGSIAWSNAYHQVKSPVAFAWTTL* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2747 780 Gene3D Peptidase S8/S53 domain 149 643 IPR036852 GO:0004252|GO:0006508
Amo13g2747 780 Gene3D - 360 498 - -
Amo13g2747 780 PANTHER CUCUMISIN-RELATED 28 777 - -
Amo13g2747 780 SUPERFAMILY Subtilisin-like 117 634 IPR036852 GO:0004252|GO:0006508
Amo13g2747 780 Pfam Peptidase inhibitor I9 38 118 IPR010259 -
Amo13g2747 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Amo13g2747 780 CDD Peptidases_S8_3 115 596 IPR034197 -
Amo13g2747 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 118 IPR037045 -
Amo13g2747 780 Pfam Fibronectin type-III domain 677 774 IPR041469 -
Amo13g2747 780 Pfam PA domain 393 477 IPR003137 -
Amo13g2747 780 Gene3D - 647 777 - -
Amo13g2747 780 CDD PA_subtilisin_like 368 489 - -
Amo13g2747 780 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Amo13g2747 780 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Amo13g2747 780 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Amo13g2747 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 777 IPR045051 -
Amo13g2747 780 MobiDBLite consensus disorder prediction 210 242 - -
Amo13g2747 780 Pfam Subtilase family 149 598 IPR000209 GO:0006508|GO:0008236
Amo13g2747 780 ProSiteProfiles Serine proteases, subtilase domain profile. 123 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2747 Amo-Chr13 56756400 56759571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2747 36 777 Subtilisin-like Serine Gene Family AT2G05920 69.044 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2747 - - gmx:100797543 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2747 13 56756400 56759571 Amo03g1424 03 36140039 36143157 hybridization