Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2745 ATGACATTCATGAAAGGAATATGGAAATCAATGTTGCCGGGTTGTTACAAAGGAGAGTACCCATCAAGAAAGCCGAAGAGAGTGGTTTCGACGAAGCCAATATGTTCGCAGAGGATATCAGTGAGTGACTTGAGCTTCCCAAGCACAACATTCTCGGAGGATCTGTCGATGTCGCTGGCGGGAACAAACCTGCATGTCTTCACGCTGGCTGAGCTCAAGCTCATCACTCAGCATTTCTCGTCCAGTAACTTCCTCGGTGAAGGCGGGTTCGGACCGGTTCACAAGGGCTTCATTGATGACAAGCTTAGGCATGGCCTTAAGCCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGCTCCCAAGGCCATAAAGAGTGGTTGACTGAAGTAGTTTTCCTGGGTCAACTAAGGCATCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGATCATAGGCTTTTGGTATATGAATACTTACCAAGAGGCAGCTTAGAAAATCAACTATTTAGAAGATTCTCAGCATCATTGCCCTGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTTTAACCTTTCTCCATGAGGCAGAGAAGCAAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTACAATGCAAAACTATCTGATTTTGGGTTAGCAAAGGATGGTCCTGAAGGAGATGACACCCACGTTTCAACTCGTGTTATGGGAACCCAAGGCTATGCTGCCCCGGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTTGGGGTAGTATTGTTAGAGCTTCTAACAGGAAGAAGATCAGTGGACAAGAGTAGGGTACCAAGGGAACAAAACCTTGTGGAATGGGCAAGGCCAATGCTTAATGACCCAAGAAAACTTGGAAGGATAATGGACCCTAAACTTGAAGGGCAGTACTCTGAAATGGGATCAAGAAAGGCTGCAGCATTGGCCTACCAATGCCTTAGCCATAGGCCCAGGAACAGGCCCACTATGAGTGCTGTTGTTAGGGTTCTTGATCCCCTTCAGGACTTTGATGATATTCCAATTGGGCCCTTTGTGTATACCGTTCCTAATGAAAGTAATAATAATAATAGTGGTGTTGAATCTTCTTTTTCTCCTTCTCCTTCTCCTAACAAGGAGAAGAAAAGTGGACATCATCATCATCATAGGCGACCACATCCACTTGCTAAATCACCTAAGTCACCAAGGCCACATTCACATTTAAATTCAGAGAATGAGAGACACCACACGAATAGAAGATCATCAACAAGTGAATCAGATTCTCCACCTTCGCATAATTAG 1356 0.4447 MTFMKGIWKSMLPGCYKGEYPSRKPKRVVSTKPICSQRISVSDLSFPSTTFSEDLSMSLAGTNLHVFTLAELKLITQHFSSSNFLGEGGFGPVHKGFIDDKLRHGLKPQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEDHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLTFLHEAEKQVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSRVPREQNLVEWARPMLNDPRKLGRIMDPKLEGQYSEMGSRKAAALAYQCLSHRPRNRPTMSAVVRVLDPLQDFDDIPIGPFVYTVPNESNNNNSGVESSFSPSPSPNKEKKSGHHHHHRRPHPLAKSPKSPRPHSHLNSENERHHTNRRSSTSESDSPPSHN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2745 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Amo13g2745 451 PANTHER OS01G0588500 PROTEIN-RELATED 24 386 - -
Amo13g2745 451 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Amo13g2745 451 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 24 386 - -
Amo13g2745 451 MobiDBLite consensus disorder prediction 399 418 - -
Amo13g2745 451 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2745 451 MobiDBLite consensus disorder prediction 378 451 - -
Amo13g2745 451 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Amo13g2745 451 MobiDBLite consensus disorder prediction 422 440 - -
Amo13g2745 451 SUPERFAMILY Protein kinase-like (PK-like) 64 388 IPR011009 -
Amo13g2745 451 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Amo13g2745 451 MobiDBLite consensus disorder prediction 378 396 - -
Amo13g2745 451 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2745 Amo-Chr13 56602732 56606066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2745 65 356 Glycoside Hydrolase AT3G07070 53.559 2.62e-100 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo13g2745 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2745 - - gmx:100797003 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2745 13 56602732 56606066 Amo13g2745 13 56602732 56606066 ECH