Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2691 ATGGAGAACGGAGAGGAAAAAGGCGTGGCGGCACATAGAACAGTAGGGACAAAGAACGAGGTTGTTCTTCGAATTCCCGAGAGCGAAAACATCATTTCCTATTCTCCTCAGCAGAAGGGTTCACCCTCAAAAGCCTTCGTAGATTCTTCAAATGTTGAACTAGCAGCTGAACTTCAGAGTCTAAAAAACAGTAGTACTGTTCAATCTCCAACTGCTACCACTTCAACCCGCTCTGTTGGTCGTTCCGAATTCTCGAAGCCAAAATCTAGATTGGTGGAACCGCCACATCCAATAGCCGCAAGCTTTCTTGAAGACAAAACCCAAATCAAGAGCTTCAAATCACCCGCAAGGACTTCCACCAGCAAAAAGACTACTCCTAATGCCACACCTCCAAGGGATGTTCCTATTACCCCAAGAACCCCTTTGATTGGGACTCCAATGGAAGAAGAAGAAGAGGAGGAGGAGGAGTTTTACAAGACCACAAACGTTGAAGTGAGCAAGAAGAGATCTGGTAAGAGGTGGAAGTTCCTGTGTATGATTGAGTGGCTTGGTTTTGTTTCCGTTGTTGGGTTCTTGATTGTATCCTTAGCAATCAAAAGGTTGCGAAATTCCGAAATATGGGGCTTGGAGCTGTGGAAATGGTGTGTTCTTGCACTGGTTATCCTCTGTGGGAGACTTGTCACTGGGTGGTTTATAAATGTTATGGTTTTCTTGATTGAAAGGAATTTCTTGTTCAAGAAGAAGGTTCTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAAGCATTTTTATGGTTGGGCATTGTTCTTATGGCATGGGGTTTGATTTTCAATCATGGGGTTAAGAGATCGAGAAGAGTTAATAGGGTTCTTGATTACATTACAAGATCTCTTGCATCTTGTCTTATTGGGGCAGCTCTATGGTTGGCGAAAATGTTGCTGATTAAGCTACTAGCTTCGCATTTCCAATCGGCTAGGTTTTTCAACCGGATTCAAGAGTCGATTTTTCATCAATACATTCTTCGGACCCTTTCAGGGCCTCCCTTGATGGAAATTGCGGAAAATGTGGGAAAGAATTCGAGTAGCGGCCGGTTGAGTTTTAAGACTTTGGTTAGGGAGAATGGGAATGAAGAGAAGAAAGAAGAGGTCATTGATGTGGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTTGACTATGAAAGGATTGATCAATGTGATAAAGAGTTCCGGATTGACCACGATTCTGCCGCAGAGTGTTGATGAAGATGAGAATGAGCAGATAGATAGTGAGATTACTAGTGAGTTGGAAGCAAAGGCAGCAGCATATCGAATTTTCAGCAATGTAGCCAAGCCAGGAAGCAAGTACATTCAGAAGGAAGACCTATTGCGCTTCATGACCAATGAAGAAGTTGAAAACCTGCTTCCGTTATTTGAAGGAGCAGTTGCAACTGGAAGAATCAAGAGGAAGTCTCTCAAGAATTGGCTGGTGAAAGTCTACCAAGAGCGTCAATCCCTTGTGCATTCGCTAAATGATACAAAAACAGCTGTCGATGATTTGAACTTGCTTGCTTCCGTGCTCATCATTATTGTGATCATCATTGTTTGGTTGCTTATAATGGGGTTCCTCACAACCCATGTTCTTCTCTTTATTACATCTCAGCTTTTACTCGCGGCGTTTATATTTGGTAACTCAGCTAAGACTGTCTTTGAAGCTATTATATTTGTTTTCGTGAGGCATCCATTTGATGTTGGCGATCGTTGTGTCATCGATGGTGTTCAGATGACTGTTGAGGAGATGAACATACTAACTACAATCTTCTTGAGATATGACAATGAAAAGATTTCATATCCAAATTCAGTTCTAGCAAACAAGCCTATCAGTAACTTCTACAGGAGTCCAGAAATGAGCGAATCAATCGAATTTTCTGTCGATATGTCGACACCAATTGAGAGTATCGCAGCTCTGAAATACTTGGAGAGCAAGCCGCAGCATTGGGGTCCGAACCATAGCGTGGTGGTTAAAGATATTGAGAATGTAGACAAGATGAAAATGGGACTAAATGTTAATCACACCATAAACTTTCAGAATTATGGGGATAAGAGCAGCAGAAGATCTGAATTACTCTTGGAGTTAAAGAAAATTCTTGAGGATCTTAAGATTAAGTATCATCTTCTGCCACAAGAAGTTCATCTGAGTTATGTAAATTCCGAAAATTCGACAAAACAAACCGTTTGGAGATGA 2250 0.4147 MENGEEKGVAAHRTVGTKNEVVLRIPESENIISYSPQQKGSPSKAFVDSSNVELAAELQSLKNSSTVQSPTATTSTRSVGRSEFSKPKSRLVEPPHPIAASFLEDKTQIKSFKSPARTSTSKKTTPNATPPRDVPITPRTPLIGTPMEEEEEEEEEFYKTTNVEVSKKRSGKRWKFLCMIEWLGFVSVVGFLIVSLAIKRLRNSEIWGLELWKWCVLALVILCGRLVTGWFINVMVFLIERNFLFKKKVLYFVYGVKKSVQAFLWLGIVLMAWGLIFNHGVKRSRRVNRVLDYITRSLASCLIGAALWLAKMLLIKLLASHFQSARFFNRIQESIFHQYILRTLSGPPLMEIAENVGKNSSSGRLSFKTLVRENGNEEKKEEVIDVDKLKKMKQEKVSALTMKGLINVIKSSGLTTILPQSVDEDENEQIDSEITSELEAKAAAYRIFSNVAKPGSKYIQKEDLLRFMTNEEVENLLPLFEGAVATGRIKRKSLKNWLVKVYQERQSLVHSLNDTKTAVDDLNLLASVLIIIVIIIVWLLIMGFLTTHVLLFITSQLLLAAFIFGNSAKTVFEAIIFVFVRHPFDVGDRCVIDGVQMTVEEMNILTTIFLRYDNEKISYPNSVLANKPISNFYRSPEMSESIEFSVDMSTPIESIAALKYLESKPQHWGPNHSVVVKDIENVDKMKMGLNVNHTINFQNYGDKSSRRSELLLELKKILEDLKIKYHLLPQEVHLSYVNSENSTKQTVWR* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2691 749 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Amo13g2691 749 MobiDBLite consensus disorder prediction 60 82 - -
Amo13g2691 749 Pfam Mechanosensitive ion channel 526 723 IPR006685 GO:0016020|GO:0055085
Amo13g2691 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 18 739 IPR016688 -
Amo13g2691 749 MobiDBLite consensus disorder prediction 113 141 - -
Amo13g2691 749 PIRSF Memb_At2g17000 9 747 IPR016688 -
Amo13g2691 749 MobiDBLite consensus disorder prediction 113 130 - -
Amo13g2691 749 Gene3D - 583 632 IPR023408 -
Amo13g2691 749 MobiDBLite consensus disorder prediction 60 95 - -
Amo13g2691 749 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 18 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2691 Amo-Chr13 54443718 54447082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2691 68 738 Mechanosensitive Ion Channel Family AT5G12080 51.684 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2691 K22048 - gmx:100777332 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2691 13 54443718 54447082 Amo13g2691 13 54443718 54447082 ECH