Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2689 ATGCGAGTACATAAACCTGAGACGAGAACAAATTGCAAGGCAAAGTTTTCTGTTCACCTAGATAAGAGTGCTTCCGTATGGCGAGTAAGGAAGATCAACAACAACCACAACCATGAATTGACTCCCCAGGTAATGGTGCACCTAATCCCAAAGTATAGGTCATTGACTGAAGGGGCGAAAGCGCAAATTGATAGATTCTGTGAGTGCGGGATATCGACGGCAAAAACAATGCGATATATGGCAGGATTGGTGGGTAGGTATTCATTGGTAGGATTTCTAAAGAAGGACGCGTACAATTATATTGACAAGCAAAGGCGCGAGCAAATTGTTGACGAAGATGCTGAATCTGCGATAGCATACCTAGAAGGAAAGGCAGAGGCTGATCCTATGCTGATGGCACGGTATAATTTGACCGAGGATAGAATGCTTGCAAATATGTTTTGGGCCGACGGGGGAAGTAGGTTGGACTACCAATATTTTGGAGATGTTCTGGCTTTCGACTCGACTTACAAAAAAAAAAAAAATAAGTACAACAGACCACTGGTTATTTTCTCAGGATCAAACAATCACAAACAGACCACGATATTCGGCTTTGGGCTAGTGTTGGATGAGACGATAGGGTCATATACTTGGCTATTGAAGAGCCTGTTGGAGGTAATGTGCCAAAAGATGCCATATGTGGTTGTAACCGATGGTGATGAAGCAATGTGGAAAGCTGTGAGAGTGGTATTCCCTAGAGCAACGCATCAGTTGTGTGGGTGGCACTTTGAGAAGAATGTCACGTCGAATGTAAAAGATGCAGGATTGCGCGCACGATTTAATCGGTGGCTTTATGCAGACATTGCAGTTAACAAATTCTTGATGGAATGGAGCTAG 876 0.4361 MRVHKPETRTNCKAKFSVHLDKSASVWRVRKINNNHNHELTPQVMVHLIPKYRSLTEGAKAQIDRFCECGISTAKTMRYMAGLVGRYSLVGFLKKDAYNYIDKQRREQIVDEDAESAIAYLEGKAEADPMLMARYNLTEDRMLANMFWADGGSRLDYQYFGDVLAFDSTYKKKKNKYNRPLVIFSGSNNHKQTTIFGFGLVLDETIGSYTWLLKSLLEVMCQKMPYVVVTDGDEAMWKAVRVVFPRATHQLCGWHFEKNVTSNVKDAGLRARFNRWLYADIAVNKFLMEWS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2689 291 PANTHER OS02G0262500 PROTEIN 8 290 - -
Amo13g2689 291 Pfam MULE transposase domain 163 259 IPR018289 -
Amo13g2689 291 Pfam FAR1 DNA-binding domain 3 41 IPR004330 -
Amo13g2689 291 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 290 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2689 Amo-Chr13 54430393 54431268 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g2689 MULE 4.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2689 - - aip:107615767 531.561