Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2653 ATGGAAAATTGGAGGGTTTTGGTGTTCATTGTGTGTGATAACTGGAGTGTGAAGGCCATCCGCAGAAAGACCACCGACACTGGCAGGATGAGCTACCTCCATCACGTGCCTTGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGTACCAAGGAAGAAGGGAGCAGCTGCATCTAGAGATACTATACATGGGAATCGTCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAAAGCAACGTTACAAGTATACAAGGTATCAATTGGTGCAGCTTGTAATCTTTCATGGCCTGCTGATTGTCTTCTCATCCAAGTTCTTGACGATTCTACTGAGCCTGCAATCAAGGTCAATGTGGTTCTCTGGTTTGAGTGGAGCAAGATCCAGACGCCTACGGATGAAGTCGTGTGCCTTATGACAGTCTAG 429 0.4709 MENWRVLVFIVCDNWSVKAIRRKTTDTGRMSYLHHVPCRFKSGFREGTEAVPRKKGAAASRDTIHGNRHHLGQALLEETKATLQVYKVSIGAACNLSWPADCLLIQVLDDSTEPAIKVNVVLWFEWSKIQTPTDEVVCLMTV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2653 142 PANTHER 60S RIBOSOMAL PROTEIN L37-1-RELATED 14 60 - -
Amo13g2653 142 PANTHER 60S RIBOSOMAL PROTEIN L37 14 60 - -
Amo13g2653 142 Gene3D - 10 53 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2653 Amo-Chr13 52494527 52496174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2653 14 60 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 78.723 2.49e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2653 K02922 - aip:107624163 123.25