Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2567 ATGGGGGTGGGGGTAGTTTTGTCATTGACTCTTCAGCTGGTGAAGCTCTTCATCATTGGCTCTGTTGTGACACTGCAAGGATCCAAAGGGTCTGTTATATCCCCATCTCCGGCATTCGCTCCGGTCATTCATCCCAGAGGAGAAACACTTGGGCCTATCCATCATGGACACTGGAGAAGCAATGCACCGAGCTCCCCAGTGGATCCAGATGGGTTTCTCCTATCCCCAAATCCAGCATCTTTGCCCATGAATCCTTCACCTAGAACCATTTCTCCGAGCTCTCCAGAAGTATCAAATGGGTCGTTCTTGCCTACTCCAGTTTCATCTCCTATTCCTCCTCATAAGATTAAGGGAATTGAACCATCCATATCTCCCAGTAGTAGTCCAACCACCATAACATTATCACCAYCGAACRAGGCTGCGCCTATATCGGCAACTGGTCAAGGGAATGCACCACCACTGCAATCAATACAACCAAGTCCACCTCAAAGGAAAGCACCTCCTATTAGGCCTCCTGAATCATCTCCAATTTCTAGAGCTCAACCTCCAAAATCTTTTGGCAAGTTTCCAAATAATTCACCAGCGAGCCAACCAATCGAACCCGGAAGTTTTCCCCCTGTGGTTGAGAATAGGAATGCTAGCAAGAGTCACACCCCGAACCCAATTTCACCAGCTCCAACTGCAGTACCATCTACCAACTTGCCTACATCTTCACCAGTAAGTCAACCAGTTGAAAATGGCAGTTTCCCCCCTAATATTCACACAGAGGGTGCAAAGAAGGGTCATTCACTGAAACCGGTTGCACCGGCTCCTCTTGCAGTCATTTTGCCCAAACTTTCACCGAGTCAGCCACCTGAACATGGAAGCTTGCCTCCAACTACTCAGAAGAGTAATTCCAGTGACAGTCACAAACAGGATCCAGTTTCACAAGCTCCAGTTGCATTATCTCCTGCAACTTTGCCAGAAAATTCACCCAACGTTCATAACAGAACTGTAAATAAGGGTCTTGCTCACACTCCAACCGCAGAGCCAGCATCACCAAATTCTTTTGCATCCCCGCCATCAAAAATGGAAAATAACCAACCAGTAGGCCGTCCTGTTCTTCCAAAAGTAACTCCATCTATATCTCCTGCACAAGTTACACCACCAAAAAGTGCATATCCAATAAATCCACCACCTTTCCACCCCGTTATACCAGCAGCATCTCCATCAAAATTACCAGCACCTGCTGTCTCTCCCACACTAACACCTTCCAGAAAATCTGATTGGAAAAGTAACGGCAAACCAGTTTCAGCACCGTTGTACAAAGCACCAAAGCCATTACCAGCTATAGTACACTCCCCTGTTCAAGTCCCAGTTGCGTCACCTCCTGTGAATTTGCCCGAAAATTCACCAGTTCGCCAACCTATTCATCAAGGAAGTTTAGCTCCTGTTGTTCATAACAAAACTGAAAATAAGGGYCATATTCACACYCAAGAGCCAGCATCACCAAATTTTCTTGCATCCCCACCATGGAAAATGGAAAATAACCAATCAGTTGGCGGTCTTGTTTTTCCAGAAATAACTCCTTCCATATCACCTGCACAAGTTGCACCACCACCTTTCCACCCAGTTTCACCACCAACAGTATCTCCATCAAAATTGCCAGTACCTGATGTCTCTCCGGCAGTACCTGTTGTTGTCTCTCCGGCACTAACTCCTTCCAGAAGCTTCGATTGGAAACGTAGGGGAGAACCAGTTTCGGCACCATTGTACAAAGCACCTATGCCGCTACCAGCTGTAGTACATCCCCCTGTTCAAGCCCATGCTGTACATAATTCAAGGCAGTTTCATCATGCTCCTGCCCCTCCGGCGTCTCCTCCTAAATCTGCATCAGAAAAAGAATATCATTCTCCTGCATCTTCACCATTAACCACATCTTATAAACATCACTCTAGGAGTATAGCCACCAGCCCTGCTCCTACATCATCATATTCGGTTTCCCCTCCGACTTCAGAACACCAAGATCACCAAATTCCTCCACCACTGCCGACAACGGAACGAACACATCATGCTTCGCCACCAGCAAACACAGGCTCTACACTTTCCTCACCAGCCAGCCAGGTTTCTCCGGCTCCTTCTCCATGGTTCATAATATCTCCTCACCCAACCAAAATTCTATTTCATCCTCCTAAAGTATCTCCTTCGCGGTCTCCTGCGGAGAGTCCTAAGAAGCCAGTCCTGCCTCAAATTCACACACTGCCTCCACCACCTCCTAATGAAGATTGTTTATCAACTATTTGTTCAGAGCCCTACACAAATTCTCCACCTGGAGCACCATGCAGATGTGTCCTTCCCATGAAAGTTGGTCTTCGCCTTGATGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCCGAGATTGCTGCAGGGGTTTTCATGACACAAAGTCAAGTTCGAATTATGGGAGCCGAAGCGGCAAGCCAAGATCCAGATAAAACTGATGCTCTCATYTTCTTGGTACCCATTGGGGAAGGCTTTGATCACACTACTGCCTTAYTGAAYTCTWAGAGATTTTGGCAGAAGAAGGTTGCAATAAAATCTTCTTACTTTGGTAGCTATGAAGTCTTGTATGTTAGCTATCCAGGTTTACCACCACCTCCTCCTCTACCACCTTCAAGCATTTCGTCGATATACGGTGGTCCATATTCAAATAATGGCAACAATGGAAGAATGATAAAGCCCCTTGGGGTGGACATACAGCAGAGGCATCACAAAGATGGACTTAGTAGGGGCATCATTGCTATTATTGCTCTCTCGGTTTTTCTTGCTCTTGTTTTATCATTGGCTGCTGGTTGGGCCTTGTTCAAGTATAGACATCATGTAAGCCAGCCAACATCAACCCCGCGTGTTTCGCCACGTTCTGTTACCAAAACACAAGGAACTACTGAATCATTAGCAGCTGGGGGAATTGCTTCAGCCTCATCATCATTTCGATCTAGCATTGCTGCTTATAAAGGATCYGCTAAGACTTTCAGTGCRARCGACATTGAGAAAGCCAGCAATAACTTTAACGATTCAAGGATACTTGGAGAAGGTGGTTTTGGTCGGGTTTATAGTGGTATTTTTGAAGATGGGACAAAAGCAGCAATCAAGGTTCTCAAAAGGGAGGATCATCATGGTGACCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGCTTATTGGTATATGCACCGAGGTTAGCTTCCGCTGCCTGGTCTATGAACTCATCCCAAATGGCAGCGTGGAATCCCATTTACATGGTGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGATTAAGATTGCTCTCGGTGCTGCGCGTGGTCTGGCTTATCTGCATGAAGATTCAAGCCCCCCTGTCATACACAGGGACTTCAAGTCTAGTAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTAGCTAGAACTGCGGCCGACGAAGAGAACAGACACATATCAACCCGTGTCATGGGAACTTTTGGATATGTGGCTCCGGAGTATGCAATGACTGGCCATCTTCTTGTGAAGAGCGATGTGTACAGCTATGGTGTTGTTCTTCTTGAGCTTCTAACAGGAAGAAAACCAGTAGATATGTCGCAAGCACCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCTTACTCACAAGTAAAGAAGGATTGGAAGCGATAATAGACCCGTCTCTAGGGACTGATGTGCCTTGGGATAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTTCAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAAGTTGTTCAGGCTCTAAAACTTGTGAGTAATGAATGTGATGAAGCAAAAGAAGCAGGTACAAGAAATTCTAGCCAGGAGGATTTATCTCTTGATTTGGATAATGTTTCTAGTCAACTACCAGATCATTTCCAATTCCAACGCCAATTCTCTGCCGCCAACTATACTTCTGGAAGTGATATCGAAAAAGGTTTGTCATCATTTGAGATATTCAGCTCCTCAGCAAGATTTGGAAGGCAAGATTCGGGATCTTTTCGACGTCACTCCTATTCGGCTCCTTTGAGAACCGGAAGAAAGCAGCAGTTGTGGCAGGTTATTAGCCGGCTTTCGGGTAGTGTAAGTGAACACAGAACCATCTCCAAGTTATGA 4230 0.4582 MGVGVVLSLTLQLVKLFIIGSVVTLQGSKGSVISPSPAFAPVIHPRGETLGPIHHGHWRSNAPSSPVDPDGFLLSPNPASLPMNPSPRTISPSSPEVSNGSFLPTPVSSPIPPHKIKGIEPSISPSSSPTTITLSPXNXAAPISATGQGNAPPLQSIQPSPPQRKAPPIRPPESSPISRAQPPKSFGKFPNNSPASQPIEPGSFPPVVENRNASKSHTPNPISPAPTAVPSTNLPTSSPVSQPVENGSFPPNIHTEGAKKGHSLKPVAPAPLAVILPKLSPSQPPEHGSLPPTTQKSNSSDSHKQDPVSQAPVALSPATLPENSPNVHNRTVNKGLAHTPTAEPASPNSFASPPSKMENNQPVGRPVLPKVTPSISPAQVTPPKSAYPINPPPFHPVIPAASPSKLPAPAVSPTLTPSRKSDWKSNGKPVSAPLYKAPKPLPAIVHSPVQVPVASPPVNLPENSPVRQPIHQGSLAPVVHNKTENKGHIHTQEPASPNFLASPPWKMENNQSVGGLVFPEITPSISPAQVAPPPFHPVSPPTVSPSKLPVPDVSPAVPVVVSPALTPSRSFDWKRRGEPVSAPLYKAPMPLPAVVHPPVQAHAVHNSRQFHHAPAPPASPPKSASEKEYHSPASSPLTTSYKHHSRSIATSPAPTSSYSVSPPTSEHQDHQIPPPLPTTERTHHASPPANTGSTLSSPASQVSPAPSPWFIISPHPTKILFHPPKVSPSRSPAESPKKPVLPQIHTLPPPPPNEDCLSTICSEPYTNSPPGAPCRCVLPMKVGLRLDVSLYTFFPLVSELASEIAAGVFMTQSQVRIMGAEAASQDPDKTDALIFLVPIGEGFDHTTALLNSXRFWQKKVAIKSSYFGSYEVLYVSYPGLPPPPPLPPSSISSIYGGPYSNNGNNGRMIKPLGVDIQQRHHKDGLSRGIIAIIALSVFLALVLSLAAGWALFKYRHHVSQPTSTPRVSPRSVTKTQGTTESLAAGGIASASSSFRSSIAAYKGSAKTFSAXDIEKASNNFNDSRILGEGGFGRVYSGIFEDGTKAAIKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDRENSPLDWSARIKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGLEAIIDPSLGTDVPWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDEAKEAGTRNSSQEDLSLDLDNVSSQLPDHFQFQRQFSAANYTSGSDIEKGLSSFEIFSSSARFGRQDSGSFRRHSYSAPLRTGRKQQLWQVISRLSGSVSEHRTISKL* 1410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2567 1409 MobiDBLite consensus disorder prediction 628 667 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 155 178 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 384 403 - -
Amo13g2567 1409 SUPERFAMILY Protein kinase-like (PK-like) 1001 1294 IPR011009 -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 316 359 - -
Amo13g2567 1409 Gene3D Transferase(Phosphotransferase) domain 1 1096 1319 - -
Amo13g2567 1409 ProSitePatterns Protein kinases ATP-binding region signature. 1026 1048 IPR017441 GO:0005524
Amo13g2567 1409 Gene3D Phosphorylase Kinase; domain 1 992 1095 - -
Amo13g2567 1409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1142 1154 IPR008271 GO:0004672|GO:0006468
Amo13g2567 1409 MobiDBLite consensus disorder prediction 490 506 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 229 249 - -
Amo13g2567 1409 PANTHER OS01G0750732 PROTEIN 576 1408 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 179 198 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 582 751 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 50 436 - -
Amo13g2567 1409 Pfam Protein tyrosine and serine/threonine kinase 1024 1293 IPR001245 GO:0004672|GO:0006468
Amo13g2567 1409 CDD STKc_IRAK 1026 1294 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 683 707 - -
Amo13g2567 1409 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 576 1408 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 451 506 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 121 154 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 90 105 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 409 425 - -
Amo13g2567 1409 MobiDBLite consensus disorder prediction 289 309 - -
Amo13g2567 1409 ProSiteProfiles Protein kinase domain profile. 1020 1296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2567 Amo-Chr13 48047253 48056410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2567 221 446 Receptor kinase-like Gene Family AT5G56890 30.702 5.92e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo13g2567 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2567 - - ccaj:109805519 1503.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2567 13 48047253 48056410 Amo03g1173 03 27119297 27128404 hybridization