Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2557 ATGCTCAAGCCTCAGAGCGGTGGTGTGGGTCTCAGAGAGTCAACATTGTTGTCTGCGCCGTGGTGCTCTGTCTCTCCCTTCGTCACTCCACTTCCAGTGTTCCAATGGAGTCTCAGACTCAGGGTGGACGTCGTGCGCTGCTTACCGCTCGCCGTTTCTACTTCTCCTCCTTGCTCGGTCACCAGTCGTCGCTGCTCCTCGTCGGTCGCCACTGCTTCCGATTGTGTTTGCTGTCTTCTAAGTCCAATTGGTACCATTCCTATCACTGAAACTGGGATTAACCCAGTTAGGAGCCTTGGTGCTGCCATCATCTTCAACAGAGACCATGCATGGAATGATCAGCATATCTCTCCTTGGTTTCCTATTAAAACATTGATGTTCCCCATCTTGTACATTGATTTGGCAAAAGCTCTCCAAAAATCTTCAAATCCAGCAGCAAATTCCTCAGTGATATGTTCAGTGTCATTACCATACAGTAATTGTTGA 486 0.4856 MLKPQSGGVGLRESTLLSAPWCSVSPFVTPLPVFQWSLRLRVDVVRCLPLAVSTSPPCSVTSRRCSSSVATASDCVCCLLSPIGTIPITETGINPVRSLGAAIIFNRDHAWNDQHISPWFPIKTLMFPILYIDLAKALQKSSNPAANSSVICSVSLPYSNC* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2557 161 Gene3D Glycerol uptake facilitator protein. 58 142 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2557 Amo-Chr13 47276922 47280254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2557 77 116 Major Intrinsic Protein MIP AT4G23400 65.000 5.82e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2557 K09872 - gmx:100780356 60.077