Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2552 ATGGAAGGATCAGCGGCTCCTTCTGGCGATTTCTCCCAAACAAAAGTTTCTTACTTCTCTGGGACAATCCCTGAAGAACTCTTCTACAAGAATTTTGATGCACTATTTCTCAACAACAATCAATTTGAAAGTGAAATTCCTCAGAATCTTAGAAATTTCCCAGCATCAGTGATAAATTTAGCCAATAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGCTAACTGGTTGCATCTCTGAAGAAGTGGGCTACAATACTCTCATGGGTCATGTACCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTACCAATTCAGTGTTGCAGTAAAAAAATTTATCGAAAAATATTACTAATTATAATTTCACAGGTGTTATTTGGTATTGGAAGAAGATTGGATCATCTAAAAATTGAGATTTTTAGAGAATTTGTTTTAATCAAATGGGTAAATACTAAAAAAGAATTGTGTAAATTAGGAGTACTTCATTATTAG 549 0.3443 MEGSAAPSGDFSQTKVSYFSGTIPEELFYKNFDALFLNNNQFESEIPQNLRNFPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCISEEVGYNTLMGHVPDTLSCLQDIQVLNLPIQCCSKKIYRKILLIIISQVLFGIGRRLDHLKIEIFREFVLIKWVNTKKELCKLGVLHY* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2552 182 Gene3D Ribonuclease Inhibitor 10 137 IPR032675 -
Amo13g2552 182 SUPERFAMILY L domain-like 18 122 - -
Amo13g2552 182 PANTHER LRR/EXTENSIN 14 124 - -
Amo13g2552 182 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2552 Amo-Chr13 47043608 47046861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2552 7 122 Leucine-rich Repeat extension Gene Families AT5G25550 40.157 1.06e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2552 - - gmx:100790827 174.096