Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2523 ATGCAGAGCCTGTTGTCAGGGTTGGAACCTTTGCTAAGAAAAGTGGTAAATGAAGAGGTGGAAAGAGTCATAATAAGACACCGTCATGGAAGTAACTACACGCGCTCCCCTTCACTGAGAATTGAAGCGGCATCATCGTCATCATCGGAGCAACCACCGAAGTTGCAACTCATGTTCACAAACGAACTTTCCCTGCCCATATTCACCTCAAGCAGAATACTCGACGCACAAGGGAACCCCATGCAAGTGATTCTTGTTGACAAAACCAACAATGATCAAATGGTTCGAACAAGCCTTCCCTATCCCGTAAAGCTAGAGCTGGTGGTTCTTGATGGTGATTTTCCCGGCGAAGAATCGTGGTGGAGCAGCGAGCAGTTTAACAGGCATATAGTGAAGGAGAGAACAGGGAAGAGGCCCTTGCTCAGCGGAGAATTGAATCTCACCATGAGGGATGACATTGCACCCATGAATGGGGACATTGAGTTTACCGATAACTCTAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTCAGGGTTTCTCCCAACCAACAAGGTGCTATCAGAATTCGTGAAGGCATCACTCAAGCCTTCGTAGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGTTGGAGGACCAAGTGTGGCGCCTAGAAAAGATCGGGAAAGACGGAGCTTTCCACAAAAAACTCTCAGCGGAGGGGATTAATACAGTCCAAGAATTCCTCAAGTTATCCGTTGTGGATCCTCAAATGCTTAGGAAGATATTAGGGATTGGGATGTCGGAGAAAATGTGGGAAGCGACAATAAAGCATGCAAAGACATGTAAAATGGGCAACAAAGTGTATATGTACAGTCATGCTAATTATACCATCTATCTGAGTCCTATATGCCAGTTGATTAGAGCTGATATCAATGGCCAAATCCTGCAAGGCCGAGACCTAAACAGCTACAATAGGGGGTATTTAGAGAAAATGGTGAGCGAAGCATATAGCAGATGGAACGAGTTGGAGGAAATTGATCAAGCCGTTTTGAATGATAACGTTGCTTTGTTAACACAAGGGGAGGAGCAATTTGCAAACAACCATGAAGCGGCAGCAGCTACACTTGAATATGATGAAAGCAAGTATTTTGGCTATGTGCCAAGCAGTAGCCATAGCCATAATAATGAGTTGCCAGACTGGGAACTGAATGCCATGGCTTACGGCTTCTCAAAGACTGGAGCTTCAACTTCTGATTCTGAGTGGCCCAATTGA 1272 0.4536 MQSLLSGLEPLLRKVVNEEVERVIIRHRHGSNYTRSPSLRIEAASSSSSEQPPKLQLMFTNELSLPIFTSSRILDAQGNPMQVILVDKTNNDQMVRTSLPYPVKLELVVLDGDFPGEESWWSSEQFNRHIVKERTGKRPLLSGELNLTMRDDIAPMNGDIEFTDNSSWIRSRKFRVAVRVSPNQQGAIRIREGITQAFVVKDHRGELYKKHHPPMLEDQVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVVDPQMLRKILGIGMSEKMWEATIKHAKTCKMGNKVYMYSHANYTIYLSPICQLIRADINGQILQGRDLNSYNRGYLEKMVSEAYSRWNELEEIDQAVLNDNVALLTQGEEQFANNHEAAAATLEYDESKYFGYVPSSSHSHNNELPDWELNAMAYGFSKTGASTSDSEWPN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2523 423 Pfam Calmodulin binding protein-like N-terminal domain 55 203 IPR046831 -
Amo13g2523 423 Pfam Calmodulin binding protein C-terminal domain 286 345 IPR046829 -
Amo13g2523 423 PANTHER OS02G0177800 PROTEIN 1 395 IPR012416 GO:0005516
Amo13g2523 423 Pfam Calmodulin binding protein central domain 215 281 IPR046830 -
Amo13g2523 423 PANTHER PROTEIN, PUTATIVE-RELATED 1 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2523 Amo-Chr13 45459287 45461622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2523 1 352 Calmodulin-binding Proteins AT5G57580 46.814 1.70e-99 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2523 - - aip:107644281 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2523 13 45459287 45461622 Amo05g4018 05 107858078 107863181 PCT
Amo05g4018 05 107858078 107863181 Amo13g2523 13 45459287 45461622 PCT