Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2496 ATGAAGAGAAAGGTGTTTCCCCTACAGCGACGGCGTTTTCAGGAGATCATGGAAAAGTACGAGGCCGTGAAGGATTTGGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGAAACAAGGAGACCAAGGAGCTCGTAGTTTTGACCCCCACTCATTTAGCAATAGTGATGGAGTATGCAGCCGGAGGAGAGCTCTTTGAGAGAATATGCAACGCTGGAAGGTTTAGTGAAGATGAMGCTAGATATTTCTTTCAGCAACTGATTTCCGGTGTCCATTACTGTCATGCCATGCAAATATGCCACAGGGATTTGAAGCTAGAAAATACTCTTTTAGATGGAAGCCCTGCACCTCGCCTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCATTGCTTCATTCAAGACCCAAATCAACTGTTGGAACTCCAGCTTATATCGCACCAGAGGTTCTTTCTAGGAGGGAGTATGATGGGAAGTTGGCTGATGTKTGGTCATGTGGAGTGACTCTTTATGTCATGCTAGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAGTACAAAATCCCGGATTATGTTCACATCTCTCAAGATTGCAGACACCTTCTTTCSCGCATATTTGTCGCTAACCCATTGAGGAGAATTTCTCTCAAGGAAATCAAGAGCCACCCATGGTTTCTAAAGAACCTACCAAGGGAGCTAACTGAATCAGCTCAAGCTGCCTACTACCAAAGAGGCAACCCAAGCTTTTCCGTTCAAAGCATAGATGAGATCATGAAAATCGTGGGAGAGGCAAGGGACCCTCCTCCGGTATCTAGGCCTGTCAAAGGTTTTGGG 879 0.4516 MKRKVFPLQRRRFQEIMEKYEAVKDLGAGNFGVARLMRNKETKELVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDXARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRISLKEIKSHPWFLKNLPRELTESAQAAYYQRGNPSFSVQSIDEIMKIVGEARDPPPVSRPVKGFG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2496 293 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2496 293 SMART serkin_6 20 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2496 293 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 46 293 - -
Amo13g2496 293 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 18 47 - -
Amo13g2496 293 PANTHER SERINE/THREONINE KINASE 46 293 - -
Amo13g2496 293 PANTHER SERINE/THREONINE KINASE 18 47 - -
Amo13g2496 293 Gene3D Phosphorylase Kinase; domain 1 4 47 - -
Amo13g2496 293 Gene3D Transferase(Phosphotransferase) domain 1 48 278 - -
Amo13g2496 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Amo13g2496 293 SUPERFAMILY Protein kinase-like (PK-like) 9 268 IPR011009 -
Amo13g2496 293 Pfam Protein kinase domain 48 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2496 Amo-Chr13 45065754 45068989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2496 32 244 CBL-interacting serine-threonine protein kinases AT2G25090 43.668 1.11e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Amo13g2496 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2496 K14498 - gmx:547968 540.421