LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g2468	ATGTTTCCAGCAACCATACCATTACTTCCAGTGCTCTTTGTCACACTCGCCCTCCCTATCACTGTATTGTTCCTAATAAGAAAACATCATGATAGATCACTCCCACCGGGACCACAGGCATTTCCGGTCTTCGGTAACCTGCCCATGCTGCTGGGGAAGTTCCCACACCGCACACTCCAAGCCATGGCCCAAAAATACGGCCCAATTATGTCCCTTCGTTTTGCGAGCCGTCGCAAAACCCAGGCAAGCGAGTACGTATCATACGGCTCCAAAGGGCTGTTGTTCTCGGAGTACGGTACGTACTGGCGCAACATGAAGAGATTGTGCACGTCGCAGCTTCTGAGCGCGTCGAAGGTGTCGTCTTTTGCTGGTGTTAGGGAGAGAGAAGTGGAAGCGACGGTGAAATCGATCAAGAGAGCTGCAGCGAGAGGTGAGGTGGTGAATATTACTGAGGCGGTGAATCATCTTGTAGAGGATACAACGTATAAGATAGTGATGGGGCGTAGTAGGGATAATGAGGTTGATTTGACTGCCCTAGTTCATGAGGCTATTAGCGTCAGTGGAGCCTTTAATATCGCAGATTATGTGCCCTGGCTTGGATCTTTTGACCTTCTTCTGGGATCCACACGAAGGTTGAAGAAAATTGCTAAAGCTGTTGACCAAGTGTTGGAGAAGATAATTGAGGAGCATCACACTAGAGGTTCTGGTTCGGGTGCATGCCATGCCTCGAGGGACCACAGGGATTTCATTGACATATTACTCTCCCTTATGAACCAACCCGTTGATCCACGTGATGAACAGAGCCAAGTCATGGATCGAACCAACGTTAAGGCTATACTCCTAGATACTATTGCAGGGTCATTTGAAACTTCTGCAACCGTTATTGTATGGGTTTTATCCGAGCTGTTAAAGCATCCAAGAGTGATGAGAAACCTTCAAGACGAGCTAGCTAATTTGGTTGGATTGAACAAATTTGTGCAAGAGACCCATTTGACAAACCTAAGTTACTTGGATATTGTGATCAAAGAAACATTACGATTACATCCTGCTGGAGCATTTTTTCCCCGCGAAACAATTAAAGATACGATGGTTAATGGTTATCATATAAGAGAAAAGACAATAATCATAATAAACTTATGGGCATTGGGAAGAGATCCTAAGGCATGGTCTAATAACGCTAATGAGTTTTATCCCGAAAGATTTTTAACTAAAAATTTTGACTACCGTGGCTACAGCTTTCAGTTTATACCATTTGGTTCTGGTAGCAGAGGATGTCCTGGAATACACCTAGGACTAACTATGGTGAAACTTATTGTGGCTCAGTTAGTACATTGCTTCACCTGGGAATTACCATCGAACATGACGCCAGATGAGTTGGACATGAACGAGAAATTTGCACTCACACTGACTAGAGCCAAGAACTTACATGCTGTGCCAACGTATCGTCTTCTTTGTGAAGTCTAA	1464	0.4474	MFPATIPLLPVLFVTLALPITVLFLIRKHHDRSLPPGPQAFPVFGNLPMLLGKFPHRTLQAMAQKYGPIMSLRFASRRKTQASEYVSYGSKGLLFSEYGTYWRNMKRLCTSQLLSASKVSSFAGVREREVEATVKSIKRAAARGEVVNITEAVNHLVEDTTYKIVMGRSRDNEVDLTALVHEAISVSGAFNIADYVPWLGSFDLLLGSTRRLKKIAKAVDQVLEKIIEEHHTRGSGSGACHASRDHRDFIDILLSLMNQPVDPRDEQSQVMDRTNVKAILLDTIAGSFETSATVIVWVLSELLKHPRVMRNLQDELANLVGLNKFVQETHLTNLSYLDIVIKETLRLHPAGAFFPRETIKDTMVNGYHIREKTIIIINLWALGRDPKAWSNNANEFYPERFLTKNFDYRGYSFQFIPFGSGSRGCPGIHLGLTMVKLIVAQLVHCFTWELPSNMTPDELDMNEKFALTLTRAKNLHAVPTYRLLCEV*	488

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g2468	487	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	24	75	-	-
	Amo13g2468	487	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	73	483	-	-
	Amo13g2468	487	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	73	483	-	-
	Amo13g2468	487	Pfam	Cytochrome P450	86	468	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g2468	487	Coils	Coil	309	329	-	-
	Amo13g2468	487	SUPERFAMILY	Cytochrome P450	33	482	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g2468	487	PRINTS	P450 superfamily signature	339	350	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g2468	487	PRINTS	P450 superfamily signature	286	303	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g2468	487	PRINTS	P450 superfamily signature	416	425	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo13g2468	487	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	418	427	IPR017972	GO:0005506\|GO:0016705

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g2468	Amo-Chr13	44261353	44263674	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo13g2468	41	485	Monolignol Biosynthesis Gene Families	AT4G36220	35.146	1.97e-100	309

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g2468	-		-	aprc:113866792	539.65

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