Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2468 ATGTTTCCAGCAACCATACCATTACTTCCAGTGCTCTTTGTCACACTCGCCCTCCCTATCACTGTATTGTTCCTAATAAGAAAACATCATGATAGATCACTCCCACCGGGACCACAGGCATTTCCGGTCTTCGGTAACCTGCCCATGCTGCTGGGGAAGTTCCCACACCGCACACTCCAAGCCATGGCCCAAAAATACGGCCCAATTATGTCCCTTCGTTTTGCGAGCCGTCGCAAAACCCAGGCAAGCGAGTACGTATCATACGGCTCCAAAGGGCTGTTGTTCTCGGAGTACGGTACGTACTGGCGCAACATGAAGAGATTGTGCACGTCGCAGCTTCTGAGCGCGTCGAAGGTGTCGTCTTTTGCTGGTGTTAGGGAGAGAGAAGTGGAAGCGACGGTGAAATCGATCAAGAGAGCTGCAGCGAGAGGTGAGGTGGTGAATATTACTGAGGCGGTGAATCATCTTGTAGAGGATACAACGTATAAGATAGTGATGGGGCGTAGTAGGGATAATGAGGTTGATTTGACTGCCCTAGTTCATGAGGCTATTAGCGTCAGTGGAGCCTTTAATATCGCAGATTATGTGCCCTGGCTTGGATCTTTTGACCTTCTTCTGGGATCCACACGAAGGTTGAAGAAAATTGCTAAAGCTGTTGACCAAGTGTTGGAGAAGATAATTGAGGAGCATCACACTAGAGGTTCTGGTTCGGGTGCATGCCATGCCTCGAGGGACCACAGGGATTTCATTGACATATTACTCTCCCTTATGAACCAACCCGTTGATCCACGTGATGAACAGAGCCAAGTCATGGATCGAACCAACGTTAAGGCTATACTCCTAGATACTATTGCAGGGTCATTTGAAACTTCTGCAACCGTTATTGTATGGGTTTTATCCGAGCTGTTAAAGCATCCAAGAGTGATGAGAAACCTTCAAGACGAGCTAGCTAATTTGGTTGGATTGAACAAATTTGTGCAAGAGACCCATTTGACAAACCTAAGTTACTTGGATATTGTGATCAAAGAAACATTACGATTACATCCTGCTGGAGCATTTTTTCCCCGCGAAACAATTAAAGATACGATGGTTAATGGTTATCATATAAGAGAAAAGACAATAATCATAATAAACTTATGGGCATTGGGAAGAGATCCTAAGGCATGGTCTAATAACGCTAATGAGTTTTATCCCGAAAGATTTTTAACTAAAAATTTTGACTACCGTGGCTACAGCTTTCAGTTTATACCATTTGGTTCTGGTAGCAGAGGATGTCCTGGAATACACCTAGGACTAACTATGGTGAAACTTATTGTGGCTCAGTTAGTACATTGCTTCACCTGGGAATTACCATCGAACATGACGCCAGATGAGTTGGACATGAACGAGAAATTTGCACTCACACTGACTAGAGCCAAGAACTTACATGCTGTGCCAACGTATCGTCTTCTTTGTGAAGTCTAA 1464 0.4474 MFPATIPLLPVLFVTLALPITVLFLIRKHHDRSLPPGPQAFPVFGNLPMLLGKFPHRTLQAMAQKYGPIMSLRFASRRKTQASEYVSYGSKGLLFSEYGTYWRNMKRLCTSQLLSASKVSSFAGVREREVEATVKSIKRAAARGEVVNITEAVNHLVEDTTYKIVMGRSRDNEVDLTALVHEAISVSGAFNIADYVPWLGSFDLLLGSTRRLKKIAKAVDQVLEKIIEEHHTRGSGSGACHASRDHRDFIDILLSLMNQPVDPRDEQSQVMDRTNVKAILLDTIAGSFETSATVIVWVLSELLKHPRVMRNLQDELANLVGLNKFVQETHLTNLSYLDIVIKETLRLHPAGAFFPRETIKDTMVNGYHIREKTIIIINLWALGRDPKAWSNNANEFYPERFLTKNFDYRGYSFQFIPFGSGSRGCPGIHLGLTMVKLIVAQLVHCFTWELPSNMTPDELDMNEKFALTLTRAKNLHAVPTYRLLCEV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2468 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 24 75 - -
Amo13g2468 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 73 483 - -
Amo13g2468 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 73 483 - -
Amo13g2468 487 Pfam Cytochrome P450 86 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 Coils Coil 309 329 - -
Amo13g2468 487 SUPERFAMILY Cytochrome P450 33 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Amo13g2468 487 Gene3D Cytochrome P450 24 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2468 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2468 Amo-Chr13 44261353 44263674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2468 41 485 Monolignol Biosynthesis Gene Families AT4G36220 35.146 1.97e-100 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2468 - - aprc:113866792 539.65