Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2467 ATGGTTCCAGCAATATTAGCACTTCCAGTGCTCTTTCTCGCACTGGCACTCACACTCACCATATTGTTCCTAATAAGTAAACATTATGATAGATCACTGCCACCGGGACCACCGGCATTTCCGGTCTTCGGTAACCTCCCCATGCTGCTGGGGAAGTCACCTCACCGAACACTCCAAGCCATGGCCCAAAGATACGGCCCGACCATGTCCCTGCAGTTAGGACAGGTCCCAGTCGTGGTTGTCTCAAACTCCGAAGCCGCAGAAGTGTTCCTCAAGACACACGACGCTGCTTTTGCTAGCCGCCCCAAAATGCAAGCCAGCGATTGCGTATTATACGGCTCCAAAGGGTTAGTGTTCTCGGAGTTCGGACCGTACTGGCGCAGCATGAGGAGGCTGTTTACGTCGCAGCTTCTGAGTGCGTCGAAGGTTTCGTCCTTTGCGCGTGCGAGAGAGAGGGGTGTGAAAGTGGCGGTGAAAGCGATCAAGAAAGCCGCAGGAAGGGGAGAGGTGGTGGATATTAGTGAATTGGTTAATAATGTTGCAGAGGATGTTGTGTATAGGATAGTGTTGGGGCGTAGTAGGCATGACGAGTTTCATTTGGCAAGCCTATTGCATGAGGCTATTAACCTCGCTGGAGCCTTTAATGTTGCAGATTACTTGCCTTGGCTTGGATCTTTTGATTTTCAGGGATTCACACGAAGGTTGAAGAGACTTGGTAAAGCCATTGACCAAGAGTTAGAGAAGATCATTGAGGAGCATGAAAAGGGTAGTTCGGGTGGATGTCATGCCTGGGGGGGCCACAGAGATTTCATTGACATATTACTCTCACTTATGAACCAACCCGTTGATCCACGTGATGAACAGAGCCAAGTCATGGATCGAACCAACATTAAGGCTCTTCTCCTAGATTCTATTGCAGGGTCATTTGAAACCTCTGCAACCGTTATTATATGGGTTTTGTCCGAGCTCTTAAAGCATCCACGAGTGATGAGAAACCTTCAAGACGAGCTAATTAGTGGGGTTGGATTGAACAAATTTGTGCAAGAGACCCATTTAGCAAATCTAAGTTACTTGGATATTGTGATCAAAGAAACATTACGATTACATCCTCCTGGAGCAATCGTGACCCGTGAGTCAACAAAAGATGCCATGGTTAATGGTTACCGTATAAGAGAAAAGACACTAATCATAATAAACTTGTGGGCAATAGGAAGAGATCCTAAGGCATGGTCTAATAATGCTGAAGAGTATTATCCGGAGAGATTTATAACTAACAATCGTGACTACCGTGGCTACAACTTTGAGTTTATACCATTTGGTGCTGGTAGCAGAATATGTCCTGGAATACACCTAGGACTTACTACGGTGAAACTTGTGGTGGCTCAGTTAGTGCATTGCTTCAATTGGGAACTACCATGGAACATGACTCCAGATGAGTTGGACATGAACGAGAAATATGGCCTCTCAAGCCCAAGAGCCAAGAACTTGCTAGCTGTGCCAACTTATCGTCTTACTTGTGAAATCTAG 1527 0.4637 MVPAILALPVLFLALALTLTILFLISKHYDRSLPPGPPAFPVFGNLPMLLGKSPHRTLQAMAQRYGPTMSLQLGQVPVVVVSNSEAAEVFLKTHDAAFASRPKMQASDCVLYGSKGLVFSEFGPYWRSMRRLFTSQLLSASKVSSFARARERGVKVAVKAIKKAAGRGEVVDISELVNNVAEDVVYRIVLGRSRHDEFHLASLLHEAINLAGAFNVADYLPWLGSFDFQGFTRRLKRLGKAIDQELEKIIEEHEKGSSGGCHAWGGHRDFIDILLSLMNQPVDPRDEQSQVMDRTNIKALLLDSIAGSFETSATVIIWVLSELLKHPRVMRNLQDELISGVGLNKFVQETHLANLSYLDIVIKETLRLHPPGAIVTRESTKDAMVNGYRIREKTLIIINLWAIGRDPKAWSNNAEEYYPERFITNNRDYRGYNFEFIPFGAGSRICPGIHLGLTTVKLVVAQLVHCFNWELPWNMTPDELDMNEKYGLSSPRAKNLLAVPTYRLTCEI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2467 508 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 504 - -
Amo13g2467 508 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 504 - -
Amo13g2467 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2467 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2467 Amo-Chr13 44232220 44239054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2467 8 508 Cytochrome P450 AT5G07990 37.548 3.82e-111 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2467 - - gmx:100814172 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2467 13 44232220 44239054 Amo05g3446 05 97194062 97200818 PCT
Amo05g3460 05 97425428 97433564 Amo13g2467 13 44232220 44239054 PCT