Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2451 ATGGGCCGTGGAAAAACAGAATTGAAGTGCCTCTCAACTGAGAAAGATCGGAAAGACAGATTCAAGACAAGAATGAAGGGACTAGAGAGCAAAATGAAGAAATTTTCTGACAAATGCCAAGGATCCGAAGCATGCTTGATAGTTTATGAAGAAGGTAGCAACGCTGCGCCGATGATTTGGCCAAAAGATTCTACAAAAGTCAGGTCCTTAATTAAAAAGTATGAAGCTCAAAAGAATGTGAGGCCTCCTAAGATCTTTGATCTCCAAGACTTCTTTGAGCACAAGAAGACCTTGGTTGAAGCCGAAACTTTGAAAGCGCGAAAATGCATCTACAGTGTCAAGTATCCCACTTCTGACTTGAATATCCATAGCTTAGATTTCGAACAACTGAGGATGTTCATTGGTATATTGGATAACAAGATTGGTGCGTGTGCTGAAAGGATTAACATGCTTAAAAATAGTCAAAAAGTTGAAAGTAACTTCAATTTTGGACACAATGTTGATCGGTACAACTCTCAGATTCAACCTATGATGCCACTTAGTTATGATATGGGTTCTAGTTCCCAAATGGGTCTCCTCAGTCCAAATCCTATGGAATTGATGGGGAGTAATTATGGACTGGTGAATTGTGCTAATCAGTTTGAAGATTCTGTGTATAGTGTTATACAAAACGGTGCTTTAGTAAATTCAACAAAAGTGAAGGAGCCAGAGCCTATGGTTCATTATGACACAAATGTGATGGAGGACACTACTAGCAAGAAAGATGAAGAAGTCCGTTTGGTTTGTACTGAGAAGACAATTGATAAAGTAAATTCCACAAATCAAGTTAGTGAGGCTTTGGATTGGGAAAGTCAATTTGCTGAGGCTGAGGCATGGGCTAGTGACTTTAGTGAGTTTGAGAATTGGATGAATCAACAAAGTGAGCATTCGGATTGGACAAACCTGAGTGAATTTGTATGTTGA 963 0.3915 MGRGKTELKCLSTEKDRKDRFKTRMKGLESKMKKFSDKCQGSEACLIVYEEGSNAAPMIWPKDSTKVRSLIKKYEAQKNVRPPKIFDLQDFFEHKKTLVEAETLKARKCIYSVKYPTSDLNIHSLDFEQLRMFIGILDNKIGACAERINMLKNSQKVESNFNFGHNVDRYNSQIQPMMPLSYDMGSSSQMGLLSPNPMELMGSNYGLVNCANQFEDSVYSVIQNGALVNSTKVKEPEPMVHYDTNVMEDTTSKKDEEVRLVCTEKTIDKVNSTNQVSEALDWESQFAEAEAWASDFSEFENWMNQQSEHSDWTNLSEFVC* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2451 320 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Amo13g2451 320 SUPERFAMILY SRF-like 2 80 IPR036879 GO:0003677|GO:0046983
Amo13g2451 320 PANTHER MADS BOX PROTEIN 4 248 - -
Amo13g2451 320 Coils Coil 11 38 - -
Amo13g2451 320 PANTHER PROTEIN, PUTATIVE-RELATED 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2451 Amo-Chr13 43355337 43357164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2451 1 147 Type I MADS-box Gene Family AT5G55690 30.519 3.93e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2451 - - adu:107479968 603.979