Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2447 ATGAGGATGATGGATTATAGCAATTGCTACCCGGAAGATCCACATGCAGTGAACTTTGCTGGTCAGAGAGGATTTCTGAAAGTATTGAAATCAGGATTCAAAGAAACATTGTTCCCTGACGATCCCTTCAGGGAGATTAAGAAAGAGGAGAAGCCATTGTTTAGAGCTATAAAATGGCTTCAGTACTTGGTTCCAATCTTCCAGTGGCTCCCGACATACACTTGGCGCTTGTTCATCTCCGACTTCTTCGCCGGCATCACCGCCACCAGTATCGCCGTTCCCCAAGCCATCAGCTATGCAAAACTTGCTGATCTTCATCCCATTATTGGCCTATATACATGTTTTGTGCCACCTATTGTGTATGCTATATTTGGGAGCTCAAGGCATTTATCAGTGGGGCCAATTGCATCAGCATCATTGCTTATATCTCAAACTATTTCAACCGTGGTAAGGCCAGAAGAAGACCCCATATTGTATCTTCACTTGGTTTTGACAACTACGTTTGTTGCTGGCCTCTTCCAAACTTGTTTGGGTTTCCTCAGGTTGGGTATATTAGTAGATTTATTATCGCATTCAACCATCACAGGTTTCATGGGAGGGGCAGCAGTAATGCTTACCCTCCAACAGCTGAAGGGCATTTTCGGCTTGAAACATTTTGCACATAAAACTGGCGTCACAACTGTGCTCAAGTCCATATGGACCTATAGACATGAGGCACCCATGGCTCCCATGACAACTGTAATAGTCGGTGGCGTCTTTACTTACCTGGTCAATGGAAAACGACATGGAATTCAAACTGTGGGTCACCTGAGTAGAGGAATAAATCCTCTTACCATCAAATACTTGAAATTTGACAGCAAATATTTAGCACCGGTGCTGAGAGCAGGTTTTATCACGGGTATTTTGTCCATGGCGGAGGGCATAGCAATAGGAAGAAGCTTTGCTGTGGTTGAAAACACGCCTCATGACGGGAACAAAGAGATGATAGCTTTTGGTCTTATGAACATGTGTGGTTCTGTTACTTCATGTTACTTGACTACTGGACCATTTTCGAAAACGGCAGTGAATTACATTGCAGGGTGTAAGACTGCGATGTCAAACTTAGTACAAGCATTCCTAGTAGCACTCACTCTTGAGTTTTTGGCTCCTCTTTTTGGTTATACACCTCTTGTTGTTCTATCAGCTATCATCATCTCTGCAGTGCTGGGCTTCCTTAATTATGCTGAAGTTGTTCATCTTTATAAAGTTGACAAGTTTGATTTCATTATTTGCATGGCTGGTTTCGTTGGAGTAATCTTCGTAGCCTTGGACATTGGTCTCATGATCTCTGTGGGTCTTAGCATTCTTAGAGCACTATTATATGTGGCAAGGCCCGATTCATGTAAGCTTGGAAAGTTACCTGACTTGGGTTGCTATCGAGATACTGATCAATATACAGTTTCAACACTCCCAGGAATTCTAATTGTTCAACTTGGTTCTCCCATGTATTTTGCGAATTCTAATTATGTCAAAGAAAGAATTATGAGGTACATTCGATGTGAAGAAGACTCTACTGGAATTACTGTTGAGCAGATCATACTGGATTTGTCAGGAGTGACATCCATTGACACCACTTCTCTTGAAGGATTATGGGAAACAAATAAAACCATTGAAAATAATGGAATGCAGTTGTCATTTGTGAACCCAAGGATAGAGGTATTAGAGAAAATGGTGGCAGCCAAATTTGTTTCGAGGGTTGGAAAAGAATCATTTTTCCTTACAGTAGAGGATGCAGTGAAGGCAAGTCAAATAGCACTTCGCAAATCGAGGGCAAGTAATTCTGAAGATGGAGTTAGAGGAACAACAATTCATCAATCTGCAGTTGATTCTTGCTAG 1875 0.4187 MRMMDYSNCYPEDPHAVNFAGQRGFLKVLKSGFKETLFPDDPFREIKKEEKPLFRAIKWLQYLVPIFQWLPTYTWRLFISDFFAGITATSIAVPQAISYAKLADLHPIIGLYTCFVPPIVYAIFGSSRHLSVGPIASASLLISQTISTVVRPEEDPILYLHLVLTTTFVAGLFQTCLGFLRLGILVDLLSHSTITGFMGGAAVMLTLQQLKGIFGLKHFAHKTGVTTVLKSIWTYRHEAPMAPMTTVIVGGVFTYLVNGKRHGIQTVGHLSRGINPLTIKYLKFDSKYLAPVLRAGFITGILSMAEGIAIGRSFAVVENTPHDGNKEMIAFGLMNMCGSVTSCYLTTGPFSKTAVNYIAGCKTAMSNLVQAFLVALTLEFLAPLFGYTPLVVLSAIIISAVLGFLNYAEVVHLYKVDKFDFIICMAGFVGVIFVALDIGLMISVGLSILRALLYVARPDSCKLGKLPDLGCYRDTDQYTVSTLPGILIVQLGSPMYFANSNYVKERIMRYIRCEEDSTGITVEQIILDLSGVTSIDTTSLEGLWETNKTIENNGMQLSFVNPRIEVLEKMVAAKFVSRVGKESFFLTVEDAVKASQIALRKSRASNSEDGVRGTTIHQSAVDSC* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2447 624 CDD STAS_SulP_like_sulfate_transporter 484 588 - -
Amo13g2447 624 ProSiteProfiles STAS domain profile. 476 595 IPR002645 -
Amo13g2447 624 PANTHER SULFATE TRANSPORTER 3.5-RELATED 241 605 IPR030316 GO:1902358
Amo13g2447 624 PANTHER SULFATE TRANSPORTER 3.5-RELATED 13 238 IPR030316 GO:1902358
Amo13g2447 624 Pfam Sulfate permease family 78 238 IPR011547 GO:0016021
Amo13g2447 624 Pfam Sulfate permease family 241 426 IPR011547 GO:0016021
Amo13g2447 624 SUPERFAMILY SpoIIaa-like 478 594 IPR036513 -
Amo13g2447 624 Pfam STAS domain 478 591 IPR002645 -
Amo13g2447 624 PANTHER SULFATE TRANSPORTER 13 238 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo13g2447 624 PANTHER SULFATE TRANSPORTER 241 605 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo13g2447 624 Gene3D STAS domain 457 598 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2447 Amo-Chr13 43158716 43162899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2447 15 603 Inorganic Solute Cotransporters AT5G19600 54.984 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2447 K17471 - gmx:100789107 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2447 13 43158716 43162899 Amo13g2447 13 43158716 43162899 ECH