Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2429 ATGCAGAGTGCCTTGGTTTCGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGCCTATTGCAGGTTTCATACACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAACTTGAGCATTGGTGGACCTGATTATTTGGATCTTCCATTTGTTGAGAAGATATGGGAAATAACAGCAAATAATATAATCATGGTCTCTGCAATTGGAAATGATGGACCGCTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGCGTTGGTGGCATTGACTATAGTGACCATATTGCTTCATTTTCCTCACGTGGCATGAGTACTTGGGAACTTCCTCATGGTTATGGTCGTGTGAAGCCAGACATAGTTGCATACGGACGGGATATAATGGGATCCAAGATTAGCAAGGGTTGCAAAAGCTTATCAGGAACAAGTGTAGCAAGTCCTGTAGTTGCCGGTGTTGTGTGCTTGCTTGTAAGTATCATCCCTGCATCCAATCGAAAAGACATCTTAAACCCAGCAAGTATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTCTCTGGGCCTAACATGTTTGAGCAAGGTGCTGGCCGAGTTGATTTGCTCGAATCATATGGGATTCTTAAGAGCTACAAGCCTAGGGCAAGTATCTTCCCCAACATCCTTGATTATACAGATTGTCCTTATACATGGCCTTTTTGTCGCCAACCACTCTATGCAGGATCTATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATTGGCTATGTCGAAGGCCCACCAACATGGCATCCTTCTGATGAGGTGGGGAATCTTTTAAGCATTCATTTTACACATTCAGAGATTATCTGGCCTTGGACTGGTTATTTAGCACTTCACATGCAAATCAAGGAAGAAGGTGCCCAGTTTTCTGGAATTATTGAAGGCAATGTAACCCTTACAGTTTCTAGCCCACCTGCTCAAGGAGAGAGCCCTCAAACTAGCATTTGTGTGCTTCAATTGAAGTTGAAAGTGGTACCGACGCCACCTCGATCCAAACGAATTTTGTGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTACATTCCGAGAGATTCGTTGGATGTTCGAAATGATATTCTTGACTGGCATGGTGATCATCTGCATACGAATTTTCACATTATGTTCAACATGTTAAGAGATGCTGATTATTATGTTGAAACACTTGGATCTCCTCTTACATGCTTTGATGCTCGTCAATATGGAACACTTTTGATGGTAGATCTTGAAGATGAGTACTTCCCCGAGGAGATTGAGAAACTTAGAGATGATGTCATGTATACTGGATTGGGGCTAGCCATCTTTGCAGAGTGGTATAATGTAGATACTATGGTGAAGATGAGATTCTTTGATGACAATACACGAAGTTGGTGGACCCCTGTTACTGGAGGATCAAATATTCCAGCACTGAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGACAAGATCCTGAATGGTGATTTTTCGCTTTTAGGCGAGCAAAGCCGATATGCTTCTGGAACAAATATTGTGAGGTTTCCTAGAGGTGGCCATGTACATAGCTTTCCCTTCTTGGATAGTTCCGAGAGTGGAGCCACTCAGAACGTGCTGTTGAATTCTGAAACCAAACCCGACTCTCCAATTCTTGGTTTCACAGAGATGGGTGAAGGTCGTGTAGCTGTTTACGGTGATTCTAATTGTTTGGACAGTAGCCATATGGTCACTAATTGTTACTGGCTCCTAAAGAAAATGCTTGATTTTACTAGTACAGATGCAAGGGATCCTGTGCTGTTCTCCAATTCAGTTAAACTAGACATTTCGTTGTACGAAGATGATAATCAATTGCCATCTCGGAGAACTGATGTCAATTTCTCAACATATTCGGCGGTTGTGGGAAAGGATTTGATTTGCCGAACTGACACAAGATTTGAAGTATGGGGAACCAAGGGCTACAGTCTGCAGCTTCAAGGAAGAACAAAAAAGTTGCCTGGTTATCCTCTCATTGATTTGGGAAGAGGGTTGAACTCAACTCTGGCTACTTCTACTAGAAGGAATCGAATATTTAACACACGGAACAAGGGTGACTCCGTTGGGAATACGTACTTGGGCCTATTCTATGGAGATGAGCTTGATGCACCTAAGCTTGTTGGTATTAACTGGCTTGTACCAGCTGTAGTTGCAGCAACGGGTTTTCTGCTATTATGTTTTTGGCGCATTCGCCAAAAGCGACGGCGGCGAAGGAAAGGATCAGGCGCTGGCAGATTGGCCAACTTATTATAG 2361 0.4286 MQSALVSHQIQRFMHFVCSLMHSLLQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISKGCKSLSGTSVASPVVAGVVCLLVSIIPASNRKDILNPASMKQALVEGAAKLSGPNMFEQGAGRVDLLESYGILKSYKPRASIFPNILDYTDCPYTWPFCRQPLYAGSMPVIFNATILNGMGVIGYVEGPPTWHPSDEVGNLLSIHFTHSEIIWPWTGYLALHMQIKEEGAQFSGIIEGNVTLTVSSPPAQGESPQTSICVLQLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDADYYVETLGSPLTCFDARQYGTLLMVDLEDEYFPEEIEKLRDDVMYTGLGLAIFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGSNIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTNIVRFPRGGHVHSFPFLDSSESGATQNVLLNSETKPDSPILGFTEMGEGRVAVYGDSNCLDSSHMVTNCYWLLKKMLDFTSTDARDPVLFSNSVKLDISLYEDDNQLPSRRTDVNFSTYSAVVGKDLICRTDTRFEVWGTKGYSLQLQGRTKKLPGYPLIDLGRGLNSTLATSTRRNRIFNTRNKGDSVGNTYLGLFYGDELDAPKLVGINWLVPAVVAATGFLLLCFWRIRQKRRRRRKGSGAGRLANLL* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2429 786 Gene3D Peptidase S8/S53 domain 17 228 IPR036852 GO:0004252|GO:0006508
Amo13g2429 786 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 26 508 - -
Amo13g2429 786 Pfam Subtilase family 29 209 IPR000209 GO:0006508|GO:0008236
Amo13g2429 786 SUPERFAMILY Subtilisin-like 27 215 IPR036852 GO:0004252|GO:0006508
Amo13g2429 786 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 538 697 - -
Amo13g2429 786 PANTHER PEPTIDASE S8 26 508 - -
Amo13g2429 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 156 166 IPR023828 -
Amo13g2429 786 ProSiteProfiles Serine proteases, subtilase domain profile. 1 222 - -
Amo13g2429 786 PANTHER PEPTIDASE S8 538 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2429 Amo-Chr13 42664304 42668853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2429 1 783 Subtilisin-like Serine Gene Family AT5G19660 78.680 0.0 1258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2429 K08653 - gmx:100797547 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2429 13 42664304 42668853 Amo13g2429 13 42664304 42668853 ECH