Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2412 AGCGGCGCCTCTCAGCCTTGCACCGCCGTCGCACCTTGCCTCGTCGTCACACTGAACCTCCGTTGCACTGAACTTCCATTGCCCCAAAACTTTGTCACACCTCCTCCCGGCTCTTCTCTGTCTGCTGGTCGTGACATTCCTTTTCAAACCCTAATGTGCATTTTCCCGCCACTGTCTTCGTCACCTCCGTCTTCGTCGCCTCCGTCCTCATCCTCTTCACCTTCTCCTGTGTTCACTCTTTCTACCTTCCCGGTGTCGCCCCTCGAGATTTTCAAACCCAACTTGACACCGTTTCGTGTTGCTTGTTCACAACGAAGAGATTTTGAACCCATCGGTTCCCATGGCTCTGAGACTCTCTGGTATTCTCATGGGAGAAGTGATTGTCTACGAGAGAAAAGTGAAGCTCCTTTATGGTTCGACATCAAAGACGATGAGAAAACACAGGTTGATGCAATGGCTCATGGAAAGATTGATGCTGAATATGTTGATGATTTTATATCAGCTTCCTCAACACACATGGTGGCTGCTATAGTCATGGGCTACTTGCACTTGCATCTTCATTGTAGCTTGGGAATTGTGGGGTCTAGAGTAGTATTTCTTATCATAGCATGGTGCATACAAATGAGAGGGTCACTATTTGTCTCCATTTTCAACCCTCTCATGCTTGTTCTTGTGCTTGTGGCTGTTGCGGCTTCTTTCATGTTAGATGAGCAATTGTATCTTAGAAGTGTGATTGGAGTAGTACTGATAGTATGTGGACTATACATGGTTCTATGGGGAAAGAACAAAGAGATGAAAAAGATAACTCAATTGCTGCCATCTGAAATCATACAATTACAGCAGTAG 846 0.4598 SGASQPCTAVAPCLVVTLNLRCTELPLPQNFVTPPPGSSLSAGRDIPFQTLMCIFPPLSSSPPSSSPPSSSSSPSPVFTLSTFPVSPLEIFKPNLTPFRVACSQRRDFEPIGSHGSETLWYSHGRSDCLREKSEAPLWFDIKDDEKTQVDAMAHGKIDAEYVDDFISASSTHMVAAIVMGYLHLHLHCSLGIVGSRVVFLIIAWCIQMRGSLFVSIFNPLMLVLVLVAVAASFMLDEQLYLRSVIGVVLIVCGLYMVLWGKNKEMKKITQLLPSEIIQLQQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2412 281 PANTHER WAT1-RELATED PROTEIN 190 277 - -
Amo13g2412 281 SUPERFAMILY Multidrug resistance efflux transporter EmrE 188 263 - -
Amo13g2412 281 PANTHER WAT1-RELATED PROTEIN 190 277 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2412 Amo-Chr13 42053125 42056642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2412 192 268 Nodulin-like Gene Family AT1G68170 55.844 1.40e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2412 - - ahf:112738094 196.052