Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo13g2390 | ATGAGAAGATGTTTTTGGCATCTTCATGGGAGTAGTTGCCAAAAAAAAAGCGATTCAGCAAGAAAAGCAGTTTGTCTAGTGAGAATGAAAATGGCGCCTCTTATTATGATTTCATCATGTTTCGTTTGGAATCTCTTTATGGTTCTTATCGGAGTAAGTGTTAGTGTCCCTGTTGAAGCTAAATCTTGGCTTAAAGCTCATGCAACCTTCTACGGGGCCAATCAAAGTCCCATCAGCCTCGGGGGAGCTTGTGGTTATGACAACACCTTTCATGCTGGGTTTGGTGTGAACACTGCGGCAGTGAGCACCATGCTCTTCAGAGGTGGTGAGGCTTGTGGAGCATGCTACCAAGTGATTTGCGACTACCGGGTCGACCCAAAATGGTGCCTCCGGCGACGAAGTGTGACCGTAACTGCCACCAATTTTTGCCCTCCGAACAACCAGGGAGGGTGGTGTGATCCACCTCACCATCACTTTGATATGTCCGCTCCGTCTTTCTTTCGCATTGCAAGACAAGGCAGTGAAGGCATTGTTCCCGTTCTCTATACAAGGGTGCCATGCAAAAGAAGAGGTGGAGTGAGATTCACGTTGAGGGGGCAATCCAATTTCAACATGGTGATGATATCCAACGTGGGAGGCAGCGGGGACGTGAAGGCCGTCTCGATCAAAGGATCGAGAGGCCGCTCGTCTTGGCTGCCTATGCACCGCAACTGGGGAGCCAACTGGCAAAGCAGTGTGGATCTCCGGAACCAGAGGCTCTCATTCAAGCTAACATTGGCAGATGGGAATACACTGCAGTTTCTCAATGTTGTTCCTTCTAGTTGGAGGTTTGGACAGACGTTTTCATCAAGAAACCAGTTCTCCTGA | 867 | 0.4902 | MRRCFWHLHGSSCQKKSDSARKAVCLVRMKMAPLIMISSCFVWNLFMVLIGVSVSVPVEAKSWLKAHATFYGANQSPISLGGACGYDNTFHAGFGVNTAAVSTMLFRGGEACGACYQVICDYRVDPKWCLRRRSVTVTATNFCPPNNQGGWCDPPHHHFDMSAPSFFRIARQGSEGIVPVLYTRVPCKRRGGVRFTLRGQSNFNMVMISNVGGSGDVKAVSIKGSRGRSSWLPMHRNWGANWQSSVDLRNQRLSFKLTLADGNTLQFLNVVPSSWRFGQTFSSRNQFS* | 289 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo13g2390 | 288 | Gene3D | - | 192 | 288 | IPR036749 | - | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 269 | 283 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 102 | 120 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 80 | 98 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 175 | 191 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 231 | 245 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | PRINTS | Expansin/Lol pI family signature | 62 | 77 | IPR007118 | GO:0005576 | |
Amo13g2390 | 288 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 202 | 283 | IPR007117 | - | |
Amo13g2390 | 288 | Gene3D | - | 51 | 188 | IPR036908 | - | |
Amo13g2390 | 288 | SUPERFAMILY | Barwin-like endoglucanases | 62 | 210 | IPR036908 | - | |
Amo13g2390 | 288 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 81 | 192 | IPR007112 | - | |
Amo13g2390 | 288 | Pfam | Lytic transglycolase | 98 | 182 | IPR009009 | - | |
Amo13g2390 | 288 | SUPERFAMILY | PHL pollen allergen | 189 | 283 | IPR036749 | - | |
Amo13g2390 | 288 | Pfam | Expansin C-terminal domain | 193 | 272 | IPR007117 | - | |
Amo13g2390 | 288 | PANTHER | EXPANSIN-A12 | 37 | 288 | - | - | |
Amo13g2390 | 288 | PANTHER | EXPANSIN-A15 | 37 | 288 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 135 | 145 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 93 | 107 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 149 | 166 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 269 | 285 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 122 | 133 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 191 | 203 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 240 | 261 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | PRINTS | Expansin signature | 203 | 224 | IPR002963 | GO:0009664 | |
Amo13g2390 | 288 | SMART | dpbb_1 | 98 | 182 | IPR007112 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo13g2390 | Amo-Chr13 | 41592369 | 41594888 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo13g2390 | 47 | 286 | Expansin Gene Family | AT3G15370 | 61.111 | 1.02e-116 | 335 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo13g2390 | - | - | ahf:112735861 | 575.859 |