Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2364 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGTCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCTTAAGTCTCACTTCTCAGTTGGGTGGCCAATAA 267 0.4157 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQSSFQELLNQAEEEFGYDHPTGGLTIPCSEDEFLSLTSQLGGQ* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2364 88 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
Amo13g2364 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 86 - -
Amo13g2364 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2364 Amo-Chr13 40857303 40857765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2364 20 78 Calmodulin-binding Proteins AT3G43120 59.322 1.85e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2364 K14488 - gmx:112998555 139.043