Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2336 ATGGAATCTGCTCCTACCTTCTTGCTCATACTCTTTTTCATTATACCTCTCTTCATCAAACTCCTCAAACACACTGATTCATCAAACAAATCAAAGCCTAGTCTCCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAACCTCCCTGAAATGCTTGCAAACAAGCCCACGTTCAGATGGATACAAAACATCATGAATGATCTCGACACTGAAATTGTATGCATCCGTCTAGGTAACATTCATGTCATCCCAGTGTCAAGTCCGTCCATTGCACGTGAATTTTTAATGAAACAAGATGCGATTTTCGCATCAAGGCCGTTGAATTGGTCGAGTAAATATGTCTCATCTGGGTACTTAACCACATCGGTAACACCCTGTGGAGAACAGTGGAAGAAAATGAAGAGAATCTTTGTGGAGGAATTGCTTTCGCCCCAAAGGCATCAATGGATGCATGACAAAAGGGCTGAAGAAGCCGACAACCTTGTCCGCTATGTGTATAACCAAACCAAGAATGGGGGTGGCCTAGTGGATTTGAGGCATGTTGGGCAACACTTTGGTGGAAACTTGAGTAGGAGGATGTTATTCAATAAGAGGTACTTTGGTAAAGGTAGAGAAGATGGGGGACCTGGTCCCGAGGAATTGGAGCATGTTGTAGCACTCTTCGTTGTGGTAAGGCACCTTTTTGCATTTCCTATTTCTGATTATCTTCCTTGCTTGTGGTGGCTTGATTTTGAAGGTCATAAAAAAATATTAAAGGAAGCTACTAACACCATAAGGAAGTACCATGATCCCATAATTGACGAAAGGATTCATCAATGGAAGAATGGGACAAGGACTCATCAAGAGGATTGGCTTGATATTTTCATCTCATTGAAAGATGCCAATAAAAATCCACTTTTGACCGTGGAGGAAATAAAAATTGGAACAATGGACAATCCATTTAATAATGTTGAATGGGTATTTTCTGAAATGATAAATCAACCAAAAATACTTCAAAAGGCTACTCAAGAATTAGACAGGGTAGTAGGAAACCAAAGGTTAGTGCAAGAATCAGATATTCCAAAACTCAACTATGTGAAGGCATGTTTAAGAGAAGGTTTTCGTCTTCACCCAATTGTAGACTTCAATGTTCCTCATGTCTCAACAGAAGACACAATCGTCGCCAATTACTTCATCCCAAAAGGTAGTCATGTTCTTATTAGGAGGCAAGGTGTTGGCCAAAATCCAAGAGTTTGGGAAGAACCATTAAAATTCAAACCTGAAAGGCATCTGAAGAGAGATGGATGTGATTTGACTTTGACTGAGCCAAGCTTGGAGTTGTTCACATTTGGCGCTGGAAGACGAAGTTGCCCTGCCATCACACTTGGTACTTATGTAACTGTTATGCTCTTTGCAAGGTTGGTTCATGGATTCACATGGATTGCACCTCCCAATGAACCAATCATTGATCTCTCTGAACTTGAAAGGGACACCTCAAAAGCTAAGCCACTAGTTGCATTCGGAAAGCCAAGATTACCAGCGGAAATGTATACCACAAATCATCAAGAACATTGTGAGGAAAGAGATCCTGGATTCCTGAGATTGAGAAGCAGACCATGA 1599 0.4128 MESAPTFLLILFFIIPLFIKLLKHTDSSNKSKPSLPPGPKPWPIVGNLPEMLANKPTFRWIQNIMNDLDTEIVCIRLGNIHVIPVSSPSIAREFLMKQDAIFASRPLNWSSKYVSSGYLTTSVTPCGEQWKKMKRIFVEELLSPQRHQWMHDKRAEEADNLVRYVYNQTKNGGGLVDLRHVGQHFGGNLSRRMLFNKRYFGKGREDGGPGPEELEHVVALFVVVRHLFAFPISDYLPCLWWLDFEGHKKILKEATNTIRKYHDPIIDERIHQWKNGTRTHQEDWLDIFISLKDANKNPLLTVEEIKIGTMDNPFNNVEWVFSEMINQPKILQKATQELDRVVGNQRLVQESDIPKLNYVKACLREGFRLHPIVDFNVPHVSTEDTIVANYFIPKGSHVLIRRQGVGQNPRVWEEPLKFKPERHLKRDGCDLTLTEPSLELFTFGAGRRSCPAITLGTYVTVMLFARLVHGFTWIAPPNEPIIDLSELERDTSKAKPLVAFGKPRLPAEMYTTNHQEHCEERDPGFLRLRSRP* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2336 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Amo13g2336 532 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 510 - -
Amo13g2336 532 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 10 510 - -
Amo13g2336 532 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo13g2336 532 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2336 Amo-Chr13 40171331 40174774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2336 12 512 Cytochrome P450 AT4G39950 53.242 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2336 - - rcu:8282195 631.713