Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2300 ATGATGAGCCTTGTCGAAGAGGAGGAATCTGTTAGGGAGTCTCAAGAAAATGCTTTCGTTTGCAGGTTAGCAAAATTACTTATGATGAGCGTCAACAAGAGGATTAATGTTCTAAAAATCAACGAGCTGAAAAGGAATTTAGGATTTCCCAATGATTACGTGATTAGGATTGTTGCAAAGTACCCGAATTTGTTCCGTGTTGTTAATGAGGGTGGGAGGAGGAGCTCTATGGAGATTGAATTGGTTCACTGGGACCCTGAATTTGCTGTATCCACAGTGGAGGCTGCAGCCAGGAGGAGCGGCAATACAAGGCCAACGTTCTCGTGTTCTTTGCCTTTCAGTTGGGTGAAATCATGGGAGAGATTCCGTGAATTCGATTTGGTTCCTTACTTTTCGCCTTACATGGACCAYAGGGAATTGGTGGARGGRTCGAAAGAGATGGAGAAGAGGAATGTGGGATTGGTACATGAGGTGTTGTCTTTGACTCTTTGGAAGAAAGCCTCAATAGTGAAGTTGGGTCATTTTAGGAGGGAGTTTGCTTTGCCTGATAGGTTGAATGTGTTGTTGCTCAAGCACCCTGGGATTTTCTATGTTTCCAACAAATATCAGATTTACACAGTTTTTCTTAGGGAGGCGTATGTTGGGTCTAAACTTGTTGAAAAGGATCCTTTGGTTGTTGTGAAGGAGAAATTTGGGGACTGA 702 0.4302 MMSLVEEEESVRESQENAFVCRLAKLLMMSVNKRINVLKINELKRNLGFPNDYVIRIVAKYPNLFRVVNEGGRRSSMEIELVHWDPEFAVSTVEAAARRSGNTRPTFSCSLPFSWVKSWERFREFDLVPYFSPYMDHRELVEGSKEMEKRNVGLVHEVLSLTLWKKASIVKLGHFRREFALPDRLNVLLLKHPGIFYVSNKYQIYTVFLREAYVGSKLVEKDPLVVVKEKFGD* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2300 233 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 1 233 - -
Amo13g2300 233 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 1 233 IPR045040 GO:0003723
Amo13g2300 233 Pfam Plant organelle RNA recognition domain 1 232 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2300 Amo-Chr13 39507893 39508594 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2300 - - aip:107627336 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g4095 01 115717728 115719312 Amo13g2300 13 39507893 39508594 PCT
Amo13g2300 13 39507893 39508594 Amo01g4095 01 115717728 115719312 PCT