Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2287 ATGTGGAGCAGGGGTTATACTCAAGGTTCAGAAAATTGCAACCGTCGTACCTTCGCCAAGCCACCTCCGTCGCGCAGCAGTCGTTCCTTCGAACAGCCACCTCCACCGCGAAGCAGCCGTCGTCCATTCGAAGGTGCTCCACCACTGCTTGGTCACTTGGTGTCGCTGTCTCCCACTCTCCCTATTGCATGTTCTGTTGAAGCCTTGAAGGCGCCTTCGAGCTTCCATAGTTCCAATGAGAGTAGCAGCAACCCTAATTACTTGGCATTTGTGATTTGGTATCAACAGGGAATTAGAGACATAACTGCTGTCCAGCTTTGTGAGACTGAGAATTTTGAGTGCAAGCTGCTAGATCGGAGCCATGGTGCAGTGTGGAGTAGCACCTGCGGCATTGATGGCATTGATAGTTGA 411 0.5134 MWSRGYTQGSENCNRRTFAKPPPSRSSRSFEQPPPPRSSRRPFEGAPPLLGHLVSLSPTLPIACSVEALKAPSSFHSSNESSSNPNYLAFVIWYQQGIRDITAVQLCETENFECKLLDRSHGAVWSSTCGIDGIDS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2287 136 PANTHER EXPANSIN-B3 79 129 - -
Amo13g2287 136 MobiDBLite consensus disorder prediction 1 46 - -
Amo13g2287 136 PANTHER EXPANSIN-LIKE B1 79 129 - -
Amo13g2287 136 MobiDBLite consensus disorder prediction 1 26 - -
Amo13g2287 136 Pfam Expansin C-terminal domain 81 128 IPR007117 -
Amo13g2287 136 Gene3D - 76 131 IPR036749 -
Amo13g2287 136 MobiDBLite consensus disorder prediction 27 42 - -
Amo13g2287 136 SUPERFAMILY PHL pollen allergen 81 129 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2287 Amo-Chr13 39277494 39279186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2287 80 127 Expansin Gene Family AT4G38400 41.667 5.20e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2287 - - gmx:100783848 93.5893