LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g2275	ATGAGCAAAGATTGGGTTGTTATTGTGTTTGTGATATTTGTTTCAAGTAGTGGAATATTATTCAGCAATAATGTTTGTGCAAAACCACCTCCTAATGTTAACATAGGAGCAATTTTAGCTCTCAACTCAACCATTGGAAAGGTGGCAAAAATTGCTATAGAAGCAGCAGTGAATGATGTAAATTCAGATTCAACCATTCTCAGTGGAACCAAGCTTAACATCTCTATGCAAGACACAAAACTATCAACTGGATTTCTAGGAATCATTGACTTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGTGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAACCTGATGATAGCAATGTCAACAAGGAAGAAATCAACAGTGCATTAGTTAAAATTGCTTTAATGGAATCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCACATTGCACAATCATTAGGCATGATGGGAAGTGGTTATGTGTGGATAGTCACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCTACAACTTCAATCATGAATGATATGCAGGGTGTTATCACCTTGAGAATGCACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTCTAAACACTTTAAGGGGTGATGGTGATACCCTKCATCTTGATACTATGGGAATGTTTCTTAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACCGGTTTAACCGGYCWRRTRRSGTTTTCTCAAGATGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATTCTTCTGGTCTTCACACTGGTGAACAAGTTCCAAACCATGGAAATTCAAGTGAATTAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAATTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTGAAGGCACTGATAAGTTTAGTGGTTATTGTATTGATGTGTTCACAGCTGCATTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATTGAATTCACTACTTCTTCAGAGGGAGTTTGATGCTGTGGTGGGGGACATTACCATTACCACAAACAGAACTAAGATTGTGGATTTCACACAACCATACATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTGGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACACTTGGGCGATTAGTCTTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTGGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAAAGAATTGGTTACTTGAGAGGATCATTTGCTGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATGACCCTTCAGAATATGAGAAGGCRTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAACTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGATGGGGCTTTTGCTGA	2283	0.389	MSKDWVVIVFVIFVSSSGILFSNNVCAKPPPNVNIGAILALNSTIGKVAKIAIEAAVNDVNSDSTILSGTKLNISMQDTKLSTGFLGIIDLMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDSNVNKEEINSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMGSGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMHTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDTMGMFLNGSMLLQKILEVNRTGLTGXXXFSQDGNLMNPSYEIINVIGTGVRRIGFWSNSSGLHTGEQVPNHGNSSELGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTEGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKTNPLNSLLLQREFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFAENYLTDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFC*	761

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g2275	760	Gene3D	-	131	414	-	-
	Amo13g2275	760	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	25	759	-	-
	Amo13g2275	760	PANTHER	GLUTAMATE RECEPTOR	25	759	-	-
	Amo13g2275	760	SUPERFAMILY	Periplasmic binding protein-like II	431	759	-	-
	Amo13g2275	760	Gene3D	-	451	562	-	-
	Amo13g2275	760	Pfam	Ligand-gated ion channel	574	677	IPR001320	GO:0015276\|GO:0016020
	Amo13g2275	760	PIRSF	IGluLR_plant	2	760	IPR017103	-
	Amo13g2275	760	SUPERFAMILY	Periplasmic binding protein-like I	27	447	IPR028082	-
	Amo13g2275	760	Pfam	Receptor family ligand binding region	93	399	IPR001828	-
	Amo13g2275	760	Gene3D	-	563	697	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g2275	Amo-Chr13	38810407	38816230	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo13g2275	27	760	Ion Channels	AT1G42540	58.508	0.0	880

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g2275	K05387		-	gmx:100790502	1203.73

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