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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo13g2275
ATGAGCAAAGATTGGGTTGTTATTGTGTTTGTGATATTTGTTTCAAGTAGTGGAATATTATTCAGCAATAATGTTTGTGCAAAACCACCTCCTAATGTTAACATAGGAGCAATTTTAGCTCTCAACTCAACCATTGGAAAGGTGGCAAAAATTGCTATAGAAGCAGCAGTGAATGATGTAAATTCAGATTCAACCATTCTCAGTGGAACCAAGCTTAACATCTCTATGCAAGACACAAAACTATCAACTGGATTTCTAGGAATCATTGACTTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTCCAATTCCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTGGCAGATATTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGTGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAACCTGATGATAGCAATGTCAACAAGGAAGAAATCAACAGTGCATTAGTTAAAATTGCTTTAATGGAATCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCACATTGCACAATCATTAGGCATGATGGGAAGTGGTTATGTGTGGATAGTCACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCTACAACTTCAATCATGAATGATATGCAGGGTGTTATCACCTTGAGAATGCACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTCTAAACACTTTAAGGGGTGATGGTGATACCCTKCATCTTGATACTATGGGAATGTTTCTTAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACCGGTTTAACCGGYCWRRTRRSGTTTTCTCAAGATGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATTCTTCTGGTCTTCACACTGGTGAACAAGTTCCAAACCATGGAAATTCAAGTGAATTAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAATTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTGAAGGCACTGATAAGTTTAGTGGTTATTGTATTGATGTGTTCACAGCTGCATTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATTGAATTCACTACTTCTTCAGAGGGAGTTTGATGCTGTGGTGGGGGACATTACCATTACCACAAACAGAACTAAGATTGTGGATTTCACACAACCATACATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTGGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACACTTGGGCGATTAGTCTTAATCATATGGCTGTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTGGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAAAGAATTGGTTACTTGAGAGGATCATTTGCTGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATGACCCTTCAGAATATGAGAAGGCRTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAACTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGATGGGGCTTTTGCTGA
2283
0.389
MSKDWVVIVFVIFVSSSGILFSNNVCAKPPPNVNIGAILALNSTIGKVAKIAIEAAVNDVNSDSTILSGTKLNISMQDTKLSTGFLGIIDLMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADIIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDSNVNKEEINSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMGSGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMHTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDTMGMFLNGSMLLQKILEVNRTGLTGXXXFSQDGNLMNPSYEIINVIGTGVRRIGFWSNSSGLHTGEQVPNHGNSSELGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTEGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKTNPLNSLLLQREFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFAENYLTDELNIHRSRLVPLNDPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFC*
761
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo13g2275
760
Gene3D
-
131
414
-
-
Amo13g2275
760
PANTHER
IONOTROPIC GLUTAMATE RECEPTOR
25
759
-
-
Amo13g2275
760
PANTHER
GLUTAMATE RECEPTOR
25
759
-
-
Amo13g2275
760
SUPERFAMILY
Periplasmic binding protein-like II
431
759
-
-
Amo13g2275
760
Gene3D
-
451
562
-
-
Amo13g2275
760
Pfam
Ligand-gated ion channel
574
677
IPR001320
GO:0015276|GO:0016020
Amo13g2275
760
PIRSF
IGluLR_plant
2
760
IPR017103
-
Amo13g2275
760
SUPERFAMILY
Periplasmic binding protein-like I
27
447
IPR028082
-
Amo13g2275
760
Pfam
Receptor family ligand binding region
93
399
IPR001828
-
Amo13g2275
760
Gene3D
-
563
697
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo13g2275
Amo-Chr13
38810407
38816230
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo13g2275
27
760
Ion Channels
AT1G42540
58.508
0.0
880
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo13g2275
K05387
-
gmx:100790502
1203.73
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