Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2272 ATGTCGTGTTCTCCATCATCATCATCATCTGAAGAAGAAGATGAGAGCTTTGAATCTTATCGAAGAGGAGGGTATCATGCTGTTAAAATTGGTGATCAATTTGCAGGTGGTAGGTACATAGCACAAAAGAAGCTTGGTTGGGGTCAATTTTCCACCGTTTGGCTTGCTTATGATACTAAAGATGAGAAATATGTTGCTCTAAAGATCCAGAAAAGTGCAGCACAATTTGTTCAAGCTGCACTTCATGAGATTGATATCCTTTCAGCCATTGGAGATGGCACTCCTTCACACACAAAATTTGTTGCTCAACTAATTGATCACTTCAAGCACACAGGTCCAAATGGAAATCACCTTTGCATGGTTCTTGAGTTTCTTGGTGACAGTTTGCTTCGTCTAATCAAATACACACGTTACAAAGGAATTCCATTGAAAAAAGTTAGGGAGATTTGCACTTGCATATTGATTGGTTTGGATTACTTGCATAGAGAACATGGCATCATCCACACTGACCTAAAACCTGAAAATATTCTTCTTATTTCTCCCATTAATCCATCTAGAGACCCTTTAAGCTCAGGAGCATCTCCCATTCTAGAAAGACCTGAAGGAAGCATCTCTCCATCTCCTAGTCACATGGAGAAGAGGCTCAAGAGGAGGGCGAGGAGGATGAGTATGAGTTTATCGATCGGCCGAGGCGATTCGATAGACGAATATCCGAAAAGGAACATAGAAGAAATTGATGTTAGGTGCAAGATAGTTGATTTTGGGAATGCTTGTTGGGCTGATAATCAATTTACAGATTTGGTTCAGACAAGGCAGTATAGGGCTCCTGAGGTTATATTGCAAGCTGGCTATTCCTACTCTATTGATATGTGGTCTTTTGCTTGTATTGCTTTTGAGCTTGCCACTGGTGACATGTTGTTCAACCCTAGGGCTGGACAGGGTTTTAGTGAAGATGAGGATCACCTTGCTTTGATGATGGAACTCCTAGGAAAGTTCCCTAAGAAGATTGCTACTTCTGGGGCGAAATGTAAGGATTTCTTTGACAGATTTGGAGATTTGAAAAGAATTAGAAGACTAAAAATGTGTCCACTGAAGAAATTGTTGGTTGAAAGRTACAAATTTTCAGAGAAAGATGCCAATGAATTTTCAGAATTTCTTTTGCCACTTCTTGATCTTTCACCAGAGAAAAGGCCAAGTGCACAACAATGCTTGCAACACCCTTGGATCAAGGACATAGACTATGCTCCATTTGACATCATCAATAATGGAAATAGTCTTGAAAATCTCAATGTTGGCATGAGAAACCTTCAAATTGCTGTAGGAAAGTGA 1329 0.3995 MSCSPSSSSSEEEDESFESYRRGGYHAVKIGDQFAGGRYIAQKKLGWGQFSTVWLAYDTKDEKYVALKIQKSAAQFVQAALHEIDILSAIGDGTPSHTKFVAQLIDHFKHTGPNGNHLCMVLEFLGDSLLRLIKYTRYKGIPLKKVREICTCILIGLDYLHREHGIIHTDLKPENILLISPINPSRDPLSSGASPILERPEGSISPSPSHMEKRLKRRARRMSMSLSIGRGDSIDEYPKRNIEEIDVRCKIVDFGNACWADNQFTDLVQTRQYRAPEVILQAGYSYSIDMWSFACIAFELATGDMLFNPRAGQGFSEDEDHLALMMELLGKFPKKIATSGAKCKDFFDRFGDLKRIRRLKMCPLKKLLVERYKFSEKDANEFSEFLLPLLDLSPEKRPSAQQCLQHPWIKDIDYAPFDIINNGNSLENLNVGMRNLQIAVGK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2272 442 Gene3D Transferase(Phosphotransferase) domain 1 93 409 - -
Amo13g2272 442 CDD STKc_SRPK 28 409 - -
Amo13g2272 442 SMART serkin_6 39 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2272 442 ProSiteProfiles Protein kinase domain profile. 39 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2272 442 SUPERFAMILY Protein kinase-like (PK-like) 33 416 IPR011009 -
Amo13g2272 442 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Amo13g2272 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Amo13g2272 442 MobiDBLite consensus disorder prediction 187 211 - -
Amo13g2272 442 PANTHER OS07G0472400 PROTEIN 8 416 - -
Amo13g2272 442 Pfam Protein kinase domain 40 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2272 442 Pfam Protein kinase domain 248 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2272 442 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 416 - -
Amo13g2272 442 Gene3D Phosphorylase Kinase; domain 1 25 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2272 Amo-Chr13 38788923 38793537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2272 7 412 EF-hand Containing Proteins AT5G22840 49.024 1.07e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Amo13g2272 Pkinase 2.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2272 K08832 - gmx:100811724 657.136