Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2270 ATGGCAGCAACATTAATGGCAGCCACAGCTAGCTCTGGCACTGTCCTGAAATCAACCCCCTTCTTTGGTCAGACTAGGGGATCCAACGCTAACCCTCTTAGAGATGTTGTCTCTATGGGAACTGGGAAATACACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACACCTTCGTACTTGACTGGAGAGTTCCCAGGAGACTATGGTTGGGACACTGCTGGTTTGTCTGCTGATCCTGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTTATCCATGGACGTTGGGCTATGCTGGGAGCACTAGGGTGCATCACCCCAGAAGTGCTAGAAAAGTGGGTCAGAGTGGACTTCAAGGAGCCAGTTTGGTTCAAAGCAGGAGCACAAATTTTCTCCGAAGGCGGCCTCGACTACTTRGGCAACCCAAATCTAGYCCATGCACAGAGCATCCTGGCAGTTCTTGGATTCCAAGTTGTCCTCATGGGCCTCGTCGAGGGCTTCCGCATCAACGGCCTCCCCGGCGTGGGCCAGGGCAACGACCTCTATCCTGGGGGACAGTACTTTGACCCTCTTGGACTTGCCGACGACCCTGTCACTTTCGCTGAGCTCAAGGTGAAGGAGATCAAGAATGGAAGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTGCAAGCCATTGTCACTGGCAAAGGACCACTTGAGAACCTTTTGGATCACCTTGATAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGTGCCTGGTTCTTGA 810 0.5136 MAATLMAATASSGTVLKSTPFFGQTRGSNANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLXHAQSILAVLGFQVVLMGLVEGFRINGLPGVGQGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2270 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Amo13g2270 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
Amo13g2270 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
Amo13g2270 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Amo13g2270 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2270 Amo-Chr13 38775296 38776791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2270 14 268 Chloroplast and Mitochondria Gene Families AT2G05070 68.182 3.97e-122 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2270 K08914 - vvi:100260599 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2270 13 38775296 38776791 Amo13g2270 13 38775296 38776791 ECH