Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2251 ATGCAGACCAGCTGTGTTGTGGATGAAAAATTTGTTCCAAAGGTGGGAATGATTTTCAAGACATTAGAAGAAGCTGGAAAGTTCTACAAACATTATTCCAAACTTGCCAGTTTTTCTACCAAAATAAGGAACACGACTCGGGACGGAGACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAATTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCAGCCAAAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGATAATTTCCAAAATTGTTTTAAATCACTCACGTCCTTGTTGTCCAGACCAGGCTGAGATGCTTAAACAACACAAGGAGGTTAGCATAGCTGTACGAGGATTGCCATATATGGATTTCGGTTTACTTGGATCACCACTTTTGGGCCGGGATGAGAAGCACGCAAAGAAGCGAGAGTATGCATTCATTTTTCAACAAAGAGTAAGCAGAGAGAGAATTCGATGCTGCAGATTTTCACACCGTGATACTATGTGCAACAAAATCAGCAATAGAGGCACAGTATACCCATGA 582 0.4021 MQTSCVVDEKFVPKVGMIFKTLEEAGKFYKHYSKLASFSTKIRNTTRDGDKIKNQLIVCSREGRWKSKISPILKTNPSAGLNCPAKIYVHIMKDVGLWIISKIVLNHSRPCCPDQAEMLKQHKEVSIAVRGLPYMDFGLLGSPLLGRDEKHAKKREYAFIFQQRVSRERIRCCRFSHRDTMCNKISNRGTVYP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2251 193 Pfam FAR1 DNA-binding domain 27 111 IPR004330 -
Amo13g2251 193 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2251 Amo-Chr13 38466708 38468287 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo13g2251 FAR1 4.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2251 - - aip:107636690 238.424