Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2240 ATGGAATGTGTCACATTGGTCTACGGTTGTGTTAGAAAGACTGCGTCTAAGTGTGATACTACAGACGGATTCTCGAAATACATAAACATGAAATTGCCGGATACATCTTCTTCATGGTTTGATAAGACAATGAATCTTGAGGAATGTCAGAGGTTATGCTTGAAAAACTGTTCTTGTACGGCGTATGCGAATTTGGATATCCGTAATGGAGGAACTGGCTGTCTACTTTGGTTCAATCATCTTGTTGACATGAGGCAATTTAATCAAAGGGGTCAAGACCTTTTCATCAAAGTCCCTAGCTCAGAGTTAGCTAATGAACATGGAAACATGAAGAAGAAGAATGTTGCAATTGTAGTAGCTGGAGTGATTATTTTTGGATTAATCATATGTGCCGGCATAGTGCTCATTAAATATCCAGGGTTAGCAAGAAATATATGGAAAAACAAGCAAAGACAGGTAGACGTTGATCTCCCAATATTCGATTTCTCAGTCTTAGCTAAAGCTACTGACAACTTTTCAAGCAACAAAAAACTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGTACATTAATAAATGGTCAAGAACTAGCCGTTAAAAGACTTTCAAAAAAGTCTGGCCAAGGATCGGAAGAATTCAAAAATGAAGTAGCATTGATAGCCAAACTCCAACACCGTAATCTTGTAAAGCTTCTTGGTTGTTGCATTCAGGGAGGAGAAAAAATATTGATCTATGAATTCATGCCAAATAAAAGTTTGGACCACGTTGTTTTCGGTAAGAAACTTTTCTTCTGTATGAAGTTTTATGTCAATTTAATATATCTACAAGTGTTATGCTAA 840 0.369 MECVTLVYGCVRKTASKCDTTDGFSKYINMKLPDTSSSWFDKTMNLEECQRLCLKNCSCTAYANLDIRNGGTGCLLWFNHLVDMRQFNQRGQDLFIKVPSSELANEHGNMKKKNVAIVVAGVIIFGLIICAGIVLIKYPGLARNIWKNKQRQVDVDLPIFDFSVLAKATDNFSSNKKLGEGGFGPVYKGTLINGQELAVKRLSKKSGQGSEEFKNEVALIAKLQHRNLVKLLGCCIQGGEKILIYEFMPNKSLDHVVFGKKLFFCMKFYVNLIYLQVLC* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2240 279 SUPERFAMILY Protein kinase-like (PK-like) 150 264 IPR011009 -
Amo13g2240 279 Gene3D Hepatocyte Growth Factor 15 96 - -
Amo13g2240 279 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 259 - -
Amo13g2240 279 Pfam PAN-like domain 18 84 IPR003609 -
Amo13g2240 279 ProSiteProfiles Protein kinase domain profile. 172 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2240 279 Gene3D Phosphorylase Kinase; domain 1 146 247 - -
Amo13g2240 279 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 6 259 - -
Amo13g2240 279 CDD PAN_AP_plant 19 99 - -
Amo13g2240 279 ProSiteProfiles PAN/Apple domain profile. 18 99 IPR003609 -
Amo13g2240 279 SMART ntp_6 19 98 IPR003609 -
Amo13g2240 279 Pfam Protein tyrosine and serine/threonine kinase 174 257 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2240 Amo-Chr13 38274222 38276026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2240 111 258 Receptor kinase-like Gene Family AT4G23320 52.288 8.42e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo13g2240 PK_Tyr_Ser-Thr 8.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2240 - - aip:107614884 358.221