Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2230 ATGGTTCCCAAACTCTCAGATTTTGGGCTCCCATGGTCCAAGAAAATTCATGCAGAAGATTATGCTGCTCTGGAGTTGTTACAAGGACATGATTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAATTCTCTTAAAAATGGTACTAACAAACAAGCTATCAATTGTTGAAGGGGTTATTTATCTCAATCTAAAGGGAAAGATTGCACTACAGTGTTGGGAAGTATTCTTGAATGTCATAAAATGCTGTTTGAAGTTTGAAGCAAATGAGAGACCAACAATGAATGAAGTGATAGCTCAACTTCAACATGACCTGGCACTGCAAGAGGAGGCAGGTTCCAACACAAGTGGTGATTACAACTTGTTATCTGTGACCTTTGATCCTCCGGTTGGAGGAAGCATATATTACTAA 414 0.3816 MVPKLSDFGLPWSKKIHAEDYAALELLQGHDFTDKCDVYSFGIILLKMVLTNKLSIVEGVIYLNLKGKIALQCWEVFLNVIKCCLKFEANERPTMNEVIAQLQHDLALQEEAGSNTSGDYNLLSVTFDPPVGGSIYY* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2230 137 SUPERFAMILY Protein kinase-like (PK-like) 2 101 IPR011009 -
Amo13g2230 137 PANTHER OS07G0166700 PROTEIN 18 124 IPR045272 GO:0004714|GO:0006468
Amo13g2230 137 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 124 - -
Amo13g2230 137 Pfam Protein tyrosine and serine/threonine kinase 18 102 IPR001245 GO:0004672|GO:0006468
Amo13g2230 137 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Amo13g2230 137 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2230 Amo-Chr13 38008425 38008935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2230 2 109 Receptor kinase-like Gene Family AT2G23200 29.371 7.37e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo13g2230 PK_Tyr_Ser-Thr 4.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2230 - - adu:107486597 265.003