Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2207 ATGTGGAAGAAGGCAAAGGATAGTGGGTGGAGGAAGAGGAGAGGGACGTCGCGAAGAGGAAGAAGACAGATGGAAAAGGGACAGAGGAGGTGGGCAGAGGAAGGGCTCATCGTTGTAGCAAGTAGGCTTATCTCACTAGATCTTGGTGAAAAAAGACCAATAATTGTTTTTGAGAATGTTGATCTTGATAAGGGTCACTGCCTACTAAAGTTGGACAATCAATGCATCATTCAGAAAGCTGCTGAAGGGACCTTCTTTGGTTACTTCTGGACAAATGGTCAGATATGCATTGCAACTTTTTGCCTTATTGTTCATTATGAAAAATTATTGAAGTTTATCTCAAACGCTAAGAGTGAGGGCGCAACCATTTTGATTGGTGGATCTTGTTCAGAGGTATGA 399 0.4236 MWKKAKDSGWRKRRGTSRRGRRQMEKGQRRWAEEGLIVVASRLISLDLGEKRPIIVFENVDLDKGHCLLKLDNQCIIQKAAEGTFFGYFWTNGQICIATFCLIVHYEKLLKFISNAKSEGATILIGGSCSEV* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2207 132 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 50 123 IPR016163 GO:0016620
Amo13g2207 132 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 43 105 - -
Amo13g2207 132 MobiDBLite consensus disorder prediction 1 30 - -
Amo13g2207 132 MobiDBLite consensus disorder prediction 1 25 - -
Amo13g2207 132 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 43 105 - -
Amo13g2207 132 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 105 131 - -
Amo13g2207 132 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 105 131 - -
Amo13g2207 132 SUPERFAMILY ALDH-like 45 129 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2207 Amo-Chr13 37017262 37023971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2207 44 131 Aldehyde Dehydrogenase Gene Family AT1G74920 41.270 1.24e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2207 K00130 - gmx:100170731 85.8853