Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2194 ATGGTCACAAAAACCCAGAACAGGCCTCCATTTTCACTCACATCCTCTCCTCCAACACCTTCTTCAAAGAACTTTGAGGTTGATGAGATGCTAATAGACAAAGGGCAAGAACAAGTTGGAGGTGAAACAATGGTGGGGACTCCCATTAATGGAAGATCAAGGCAAGCTTTTTCACTTGTGAATGGTGTTGGTGGTGGCCATGATCTTACTCCTGGTAGTGCTCCACCAAGCAATGCTGGATCAGACTATGGCATAATAGAGTTCACAAGAGAGGATGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACATTGAGATGAGCTACTCACTGGAACAGGAGAGGTTGAAGAACTCATTGGAACTAACACAGCAAAAATGCATGGAAATTGAGTTGCTGCTAAAAATCAAGGAAGACGAACTGAACTCAATTATCACAGAAATGAGACGGAACTGCACTAATTTACAAGAAAAGTTGGTCAAGGAAGAAACAGAAAGGGCGGCTGCAGCCGAATCTCTTGAGAAAGAGCGGGAGTCCAGGATTAACATCGAGAGGTCACATACCACTTTGTCTGAGGACCTTGGGAGAGCACAAAGAGAGATCCAAAGTGCAAATCAGAAGATATCGTCGCTCAACGAGATGTATAAGCGGTTACAGGATTACATAACAAGCTTACAACAGTATAACGGAAAACTTCATACAGAGCTTTCAACAGTTGAAGATGAACTTAAACGCGTTGAGAAAGAAAAGGCTACTGTGGTGGAGAATATCACCATATTAAGGGGTCAACTTACATTGTCCATTGCTTCTCAAGAAGAGGCTGTAAAACAGAAGGATGTTCTAGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCAACAAGTAAGAGAAGAACGAGACCGACAACTGTCTCAAGTGCAAATGCTGAGTTCTGAATTAGAGAAAGTTAAAGAATCTACTGAAAACTCATCTTCTGAACTGGACAAGTTGACTTTAAAAGCGAATGAACTAGAGCTAGCAACTGCAGAGAAGAAACTGCAGGTGTCTGATATATCAGTAATTGAGACAAGGACTGAATATGAAGGGCAACAGAAATTCGTAAATGAGTTACAACAACGCTTAGTGGATGCAGAATATAAACTTATAGAAGGGGAGATGCTGCGGAAAAAATTACACAATACCATTTTGGAATTAAAAGGGAACATTCGTGTTTTCTGTCGAGTGAGGCCATTGTTGCCCGATGAAAGTTGTAGTTCAGAAGGCAAGATCTTCAGTTATCCAACATCAATGGAAGCTTGTGGAAGAGGCATTGACCTAGCTCAAAATGGCCAAAAACATTCTTTCACCTTTGATAAAGTTTTTGCACCAGAGGCATCACAAGAAGAAGTTTTCGTAGAAATTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCTGAYGAAAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAAACAAAACAGTCTCAGCAGCCTCAAGGCTGGAAATATGAAATGCAGGTGTCGATGTTGGAAATATACAACGAAACAATTCGTGATCTGCTATCTACAACACGCCAAGAGAATGGTACTCCTGGAAAACAGTATACAATTAAACATGATACAAGTGGAAATACACATGTTTCTGATCTCACAGTAGTCGATGTTCAGAGTGCTAGAGAGGTTGCATTTCTATTGAACCAAGCCGCAAATAGCAGGTCAGTGGGAAAGACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACCCTTAGAATATATGGTGTAAATGAGAGCACTGAACAACAAGTGCAAGGTGTTCTGAATCTTATTGATCTTGCTGGTAGTGAGCGTCTATCAAAGAGTGGCTCAACCGGGGATAGGTTAAAAGAAACTCAGAAGGAGGATCACGTGCCTTTCAGGAACTCAAAGCTTACTTATCTACTTCAGCCATGTCTAGGAGGAGACTCAAAGACACTAATGTTTGTGAACATCTCACCAGACCCATCTTCACTTGGTGAGTCACTTTGCTCGCTCAGGTTTGCTTCCAGAGTCAATGCATGTGAGATTGGAACTCCTCGCCGCCAAACCAATGGAAAATCCACTGAATCTCGATTGAGCTACTTCTAA 2244 0.4118 MVTKTQNRPPFSLTSSPPTPSSKNFEVDEMLIDKGQEQVGGETMVGTPINGRSRQAFSLVNGVGGGHDLTPGSAPPSNAGSDYGIIEFTREDERCENMIDYIKRLKVCIRWFQDIEMSYSLEQERLKNSLELTQQKCMEIELLLKIKEDELNSIITEMRRNCTNLQEKLVKEETERAAAAESLEKERESRINIERSHTTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSTVEDELKRVEKEKATVVENITILRGQLTLSIASQEEAVKQKDVLASEVASLRGELQQVREERDRQLSQVQMLSSELEKVKESTENSSSELDKLTLKANELELATAEKKLQVSDISVIETRTEYEGQQKFVNELQQRLVDAEYKLIEGEMLRKKLHNTILELKGNIRVFCRVRPLLPDESCSSEGKIFSYPTSMEACGRGIDLAQNGQKHSFTFDKVFAPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPDEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTTRQENGTPGKQYTIKHDTSGNTHVSDLTVVDVQSAREVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSLGESLCSLRFASRVNACEIGTPRRQTNGKSTESRLSYF* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2194 747 Coils Coil 330 357 - -
Amo13g2194 747 Pfam Kinesin motor domain 417 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 Coils Coil 148 182 - -
Amo13g2194 747 ProSiteProfiles Kinesin motor domain profile. 411 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 Coils Coil 288 322 - -
Amo13g2194 747 Coils Coil 197 231 - -
Amo13g2194 747 MobiDBLite consensus disorder prediction 1 23 - -
Amo13g2194 747 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 PRINTS Kinesin heavy chain signature 645 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 PRINTS Kinesin heavy chain signature 614 631 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 PRINTS Kinesin heavy chain signature 487 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 Coils Coil 239 266 - -
Amo13g2194 747 ProSitePatterns Kinesin motor domain signature. 644 655 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo13g2194 747 PANTHER KINESIN-LIKE PROTEIN 31 746 - -
Amo13g2194 747 CDD KISc_C_terminal 409 728 - -
Amo13g2194 747 PANTHER KINESIN-LIKE PROTEIN KLP-3 31 746 - -
Amo13g2194 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 724 IPR027417 -
Amo13g2194 747 SMART kinesin_4 409 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g2194 747 Gene3D Kinesin motor domain 354 728 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2194 Amo-Chr13 36793736 36801420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2194 164 738 Calmodulin-binding Proteins AT5G65930 30.782 2.46e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2194 K10405 - gmx:100784221 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2194 13 36793736 36801420 Amo13g2194 13 36793736 36801420 ECH
Amo13g2194 13 36793736 36801420 Amo03g0330 03 6173118 6181338 hybridization
Amo08g1406 08 22915000 22919504 Amo13g2194 13 36793736 36801420 PCT
Amo13g2194 13 36793736 36801420 Amo08g1406 08 22915000 22919504 PCT