Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2171 ATGGCTACCTCAATTTTAAGGTCAAATAAAGTAGTTCATTCATTAGGGTTGTTGTGTGTGTTACTTTTGGTGCATGAGGGTGCTGCTTATGATTTCATAGTTGGAGGTCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATTTCAATCCTTTCAATTCATGGGCAGAAAAGAGCCGTTTTCAAATTGGAGACTCTCTAGTGTTCAACTACCAATCTGGGCAAGACTCAGTGCTGCAGGTGAAGAGCGAAGACTATGCAAGCTGCAACACAAACTCACCATATGCAAAGTTTTCAGACGGCCACACAGTGTTCAAGCTCACCCAATCAGGCCCATACTTCTTCATTAGCGGCAACAAAGATAACTGCCTCAAGAACCAGAAGCTAACCGTCATTGTCATGGCCGACAGAACCAACCGCACCTCCTCCACAGCAAGTCCCACTTCTTCGCCACCTTCGCCGCAGCCGCCATCAGCGCCTTCACCGGCCCCAACCGGCCAAGAAGGGCAGTCTTCTCCTCCACCTGCAGGAACTGTGGAAACAAATCCAACACCCGCACCGTCCAGTGAAGGACATCATCCTCCTAATGCTGCCGCCTCCGCCTTRGTCAACTTTGCTGCTTCGCTTSTAGCAATATCCATGGCTTCTTCAGCTCTCATGTTTTCTCTCTAG 669 0.4858 MATSILRSNKVVHSLGLLCVLLLVHEGAAYDFIVGGQKGWSVPSDSNFNPFNSWAEKSRFQIGDSLVFNYQSGQDSVLQVKSEDYASCNTNSPYAKFSDGHTVFKLTQSGPYFFISGNKDNCLKNQKLTVIVMADRTNRTSSTASPTSSPPSPQPPSAPSPAPTGQEGQSSPPPAGTVETNPTPAPSSEGHHPPNAAASALVNFAASLXAISMASSALMFSL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2171 222 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Amo13g2171 222 CDD OsENODL1_like 30 133 IPR041846 -
Amo13g2171 222 MobiDBLite consensus disorder prediction 134 197 - -
Amo13g2171 222 PANTHER BLUE COPPER PROTEIN 5 213 IPR039391 GO:0009055
Amo13g2171 222 MobiDBLite consensus disorder prediction 148 168 - -
Amo13g2171 222 MobiDBLite consensus disorder prediction 169 186 - -
Amo13g2171 222 Gene3D - 30 145 IPR008972 -
Amo13g2171 222 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Amo13g2171 222 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Amo13g2171 222 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2171 Amo-Chr13 35981439 35983385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2171 15 201 Phytocyanin Superfamily AT3G20570 54.011 4.80e-59 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2171 - - gmx:100792916 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2171 13 35981439 35983385 Amo13g2171 13 35981439 35983385 ECH