Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2139 ATGGATCGGAGCTCCTTCTCTGCCGGAACCCGGAAGGCCCAACCCAAATCCGATATATACTCTACCTTCGTCGTCCACAACGATGATGACGTCGGAGACGGCGGAACAATCCGCCGCCGGAAATCCGGAATCCCGGAGTCACAGGAGGATCTATACGGGACAATGGTGTACAAAGAGAACGGCCACGACGACGACGACGAAGACTCCTCCCTCCCTCCACTCCTCAAGCGCCTTCCCAAGGACTTCGGAGGCGGTGCCTCGATGGATTACGACGACGACGACGACGACGACGAAGGTGCTGGAGATTTTGGCACCATGATTGTGAAGACTGACCGGAGCCGGCAGCGGGAGCGGTCTTCTTCTTCCGGCTTGGTTTCGCCATCGGGATCGACCTGGAAGGCTCAGAGTTCTTCTCAGGCGAGCGTCGGCGGAGACGACGACGATGACGACGACGACGGTGGCGGTTTTGGGACGTTCGTTGTGCGCTCGACGGTGAGATCCAGCGAGAGAGAGTCGATAAGCGGAACCGTGGTGCGTAGGACCGCCGGCGGCAGTGGTGCCGGTTCAACGATGGAGAGGGCTGTGGCGAGCATGCAGGCGGCGGGAGAATTTGGGAAGCAGAGGAAAGGGAGCGGTTCCTCGCAGAACGAGGATGCGAGGCAGCAATTGATAACAACGAAGATTTCGGCGAGTTCGATCCCGGAGAGTGTTACCAGAGAGGATCCTACAACCAAGTATGAATTGCTCAATGAACTTGGGAAGGGATCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGGACATCGGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTTGTCCGCTATCTTGGGAGCTACCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAGCGTGACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAGTACTTGCACTCAATTTTCAAAGTCCATCGAGACATTAAAGGCGGAAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTGACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCGATTGAAATGGCTGAGGGAGTTCCTCCAAGATCATCAGTGCATCCGATGAGGGTTTTATTCATGATATCCATTGAGCCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTGTATTTTCATGATTTTGTTGCGAAGTGCCTGACCAAAGAGCCTCGGCTCCGCCCCACTGCATCTGAGATGTTGAAGCATAAATTCTTTGAAAAATGGAAAACTGGATCTGCTGCGGTGTTGCCAAAACTGGAAAAGGCAAGGCAAATCAGGGCATCAATGGCTTTGCAGGTGCAAACTCTTGCCCCAACTCCATTGGAAGATGAGCCCATGGCAACTTCCATGCTAAATGATGAATATGGAGATACTGTTCCATCCGGACATCAGAACCTAGCAGTGCAGGAGGCCACTGATCTTTCTTCAAGTGGTGGCGTGAGGGAAGATGATGGAGGTGAAGGAAACTTTGGAACTATGATAGTCCATGGAGATGAGGTACATAAGATCACACAGGATGGAGATTCTGCAGGTTCCTTATCTGCTTTCACGGGTGGAACAGGATTGGCCGACTCTAGGGTTGACACCCTAAAAGTTGGTACAACAAACATTGCCTCTTTTAGAGGATCTAATCCAACTACAGATACCATACAATCAACTTTACCTCGTGTTAGAAATTCAACCGAGCAGAACCTCAAAACGCAAGGTAGTTTTCGTGCACACGCTGGAATTGGTAGTGATATAAGCACTGGCACGTTGAAGAATGATACAGTCTTCCGCAAGTCATTTGCTTTACAGGATAAGCTATGGTCCATTTATGCAGCTGGTAATACAGTGCCCATTCCGTTCTTAAGGGCTACAGACATATCCCCAATTGCTCTGCTGTCAGATAATGTGCTTGGTGGCTTGCAACCAGATACCAGTGAGACTGGGGAAGTAGAATCATTGCAAGAGCTTTTTAGTGGTGATGTGCAATCCAAAAAGGGTCGGAGAGGACTAAATGAGGTGACTTTGTGCACTTTCTTGTCATGCGCTTCTTATGACCTTATGACTCTTTTTATCAGTTTGCTAATTGACATGCAGCAGATGCCCCTTCCTCCAAGCATTTACCAGCGGCTTACATCAAGTTCCACTCTAATGAATTTGGCTCAGGCTTTAGCTTATCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGTTGCAAGCAACGCAGGAGCAGCGGACAATTCAAAATCTCTCGGACACGCTTAGAACCATTCTTCGTTTGTAG 2556 0.4859 MDRSSFSAGTRKAQPKSDIYSTFVVHNDDDVGDGGTIRRRKSGIPESQEDLYGTMVYKENGHDDDDEDSSLPPLLKRLPKDFGGGASMDYDDDDDDDEGAGDFGTMIVKTDRSRQRERSSSSGLVSPSGSTWKAQSSSQASVGGDDDDDDDDGGGFGTFVVRSTVRSSERESISGTVVRRTAGGSGAGSTMERAVASMQAAGEFGKQRKGSGSSQNEDARQQLITTKISASSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMSVTDEALDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAVLPKLEKARQIRASMALQVQTLAPTPLEDEPMATSMLNDEYGDTVPSGHQNLAVQEATDLSSSGGVREDDGGEGNFGTMIVHGDEVHKITQDGDSAGSLSAFTGGTGLADSRVDTLKVGTTNIASFRGSNPTTDTIQSTLPRVRNSTEQNLKTQGSFRAHAGIGSDISTGTLKNDTVFRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQPDTSETGEVESLQELFSGDVQSKKGRRGLNEVTLCTFLSCASYDLMTLFISLLIDMQQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2139 851 MobiDBLite consensus disorder prediction 31 46 - -
Amo13g2139 851 MobiDBLite consensus disorder prediction 56 74 - -
Amo13g2139 851 ProSiteProfiles Protein kinase domain profile. 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2139 851 Pfam Protein kinase domain 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2139 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 189 841 - -
Amo13g2139 851 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 189 841 - -
Amo13g2139 851 MobiDBLite consensus disorder prediction 200 219 - -
Amo13g2139 851 MobiDBLite consensus disorder prediction 1 21 - -
Amo13g2139 851 SUPERFAMILY Protein kinase-like (PK-like) 243 501 IPR011009 -
Amo13g2139 851 MobiDBLite consensus disorder prediction 1 194 - -
Amo13g2139 851 CDD STKc_MAP4K3_like 245 500 - -
Amo13g2139 851 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Amo13g2139 851 MobiDBLite consensus disorder prediction 119 142 - -
Amo13g2139 851 SMART serkin_6 246 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo13g2139 851 MobiDBLite consensus disorder prediction 161 179 - -
Amo13g2139 851 Gene3D Transferase(Phosphotransferase) domain 1 242 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2139 Amo-Chr13 34903212 34917375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2139 1 851 MAP Kinase Kinase Kinase Kinase AT1G69220 58.174 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Amo13g2139 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2139 - - gmx:100804995 1225.31